RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CDK5RAP3Q96JB5 506 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 HIST1H2AHQ96KK5 128 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 HIST1H2AJQ99878 128 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 NT5C3AQ9H0P0 336 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 NELFAQ9H3P2 528 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 POLR1BQ9H9Y6 1135 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 DMRT3Q9NQL9 472 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 SMPD4Q9NXE4 827 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 TRPS1Q9UHF7 1281 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 LIMCH1Q9UPQ0 1083 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 CORO2BQ9UQ03 480 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 TESMINQ9Y4I5 508 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 SNX13Q9Y5W8 968 aa3.41□□□□□ -1.86
CSDE1-209ENST00000525132 A0A087WV62 115 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 DENND3A2RUS2 1198 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 SLC38A8A6NNN8 435 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 hCG_1984214I3L0E3 225 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 J3KRW8 73 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 K7EM74 188 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 M0R3H8 397 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 HTRA2O43464 458 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 SNX2O60749 519 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF623O75123 536 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 USP12O75317 370 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 TOX4O94842 621 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 RHOBTB3O94955 611 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 JUNP05412 331 aaKnown RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 SPATA31D3P0C874 917 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 STAG3L1P0CL83 205 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 CDK4P11802 303 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 EDNRBP24530 442 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 SMARCA1P28370 1054 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 GDI1P31150 447 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 HIBADHP31937 336 aaKnown RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 RPS19P39019 145 aaKnown RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 SELENOPP49908 381 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 DUSP3P51452 185 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 METAP1P53582 386 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 MAPK10P53779 464 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 WNT3AP56704 352 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 CDK17Q00537 523 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 CNTN2Q02246 1040 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 PPARAQ07869 468 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 PPP3CAQ08209 521 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 ST3GAL1Q11201 340 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 ADRM1Q16186 407 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 MST1LQ2TV78 715 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 FAM174BQ3ZCQ3 159 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 LACTB2Q53H82 288 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 C19orf54Q5BKX5 351 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 ZRANB3Q5FWF4 1079 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 MBNL2Q5VZF2 373 aaKnown RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 SWSAP1Q6NVH7 229 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 PGBD2Q6P3X8 592 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 SPATA31D4Q6ZUB0 917 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 PARS2Q7L3T8 475 aaKnown RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 MAEAQ7L5Y9 396 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 POLNQ7Z5Q5 900 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 GRASPQ7Z6J2 395 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 CIARTQ8N365 385 aaPredicted RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 KLHDC4Q8TBB5 520 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 NSUN6Q8TEA1 469 aaKnown RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 TBC1D22AQ8WUA7 517 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 ARL8AQ96BM9 186 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 PPM1MQ96MI6 270 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 C8orf49Q96NF6 230 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 LRRC37BQ96QE4 947 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 TRMT61BQ9BVS5 477 aaKnown RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 ZBP1Q9H171 429 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 IFT122Q9HBG6 1241 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 TRPV5Q9NQA5 729 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 MIS18AQ9NYP9 233 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 PLA2G3Q9NZ20 509 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 SPG21Q9NZD8 308 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 DPP7Q9UHL4 492 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 ST6GALNAC2Q9UJ37 374 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 TPCN1Q9ULQ1 816 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 TSC22D4Q9Y3Q8 395 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 PCDHGB2Q9Y5G2 931 aa3.4□□□□□ -1.87
CSDE1-209ENST00000525132 RBM8AQ9Y5S9 174 aaKnown RBP3.4□□□□□ -1.87
CSDE1-209ENST00000525132 LCTP09848 1927 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 PRSS47A8MTI9 375 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 KCNN4O15554 427 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 FSBPO95073 299 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 APOL3O95236 402 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 CNPP09543 421 aaKnown RBP3.39□□□□□ -1.87
CSDE1-209ENST00000525132 C1SP09871 688 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 GHRP10912 638 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 ALAS1P13196 640 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 HTR1EP28566 365 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 WASP42768 502 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 STT3AP46977 705 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 LGALS4P56470 323 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 BPIFB4P59827 614 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 CCT2P78371 535 aaKnown RBP3.39□□□□□ -1.87
CSDE1-209ENST00000525132 ATP8B2P98198 1209 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 ICA1Q05084 483 aa3.39□□□□□ -1.87
CSDE1-209ENST00000525132 ZNF543Q08ER8 600 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms