RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ANKRD11Q6UB99 2663 aaPredicted RBP3.35□□□□□ -1.87
CSDE1-208ENST00000524652 TRIOBPQ9H2D6 2365 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 CCL15-CCL14A0A0B4J2E2 113 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 FAM90A8PA6NJQ4 464 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 F5H6K3 240 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 IFIT3O14879 490 aaKnown RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 CYTH3O43739 400 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 RASSF9O75901 435 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 PLEKHA8P1O95397 391 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 CTDNEP1O95476 244 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 NDUFB10O96000 172 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 TOMM40O96008 361 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 SLC3A2P08195 630 aaKnown RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 PDGFRBP09619 1106 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 FAM90A13PP0C7W8 464 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 FAM90A24PP0C7X0 464 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 CTSAP10619 480 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 CD19P15391 556 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ZKSCAN1P17029 563 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 MCCP23508 829 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 MCM5P33992 734 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 SLC16A2P36021 539 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 TM4SF4P48230 202 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 PTDSS1P48651 473 aaKnown RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 CTCFP49711 727 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 RAB27AP51159 221 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 PGDP52209 483 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 EPHB1P54762 984 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 EVCP57679 992 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ANAPC15P60006 121 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 SNAP25P60880 206 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 HSF1Q00613 529 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 KLRC3Q07444 240 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 MFSD13AQ14CX5 517 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 WTAPQ15007 396 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 CCL15Q16663 113 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ST3GAL2Q16842 350 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF750Q32MQ0 723 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 LEXMQ3ZCV2 418 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 FAM83BQ5T0W9 1011 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 APOA5Q6Q788 366 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 BLOC1S2Q6QNY1 142 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 C9orf47Q6ZRZ4 202 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 NOL8Q76FK4 1167 aaKnown RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 DGKHQ86XP1 1220 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 FBXL16Q8N461 479 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ARFGAP1Q8N6T3 406 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 C12orf76Q8N812 135 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 PNPLA1Q8N8W4 532 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 MPLKIPQ8TAP9 179 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 SMCR8Q8TEV9 937 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ZFYVE19Q96K21 471 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 UBA5Q9GZZ9 404 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ZCWPW1Q9H0M4 648 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ALDH8A1Q9H2A2 487 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 FAM83DQ9H4H8 585 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 RPAP3Q9H6T3 665 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 POT1Q9NUX5 634 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 TMEM184CQ9NVA4 438 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 HEY2Q9UBP5 337 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 NKX1-2Q9UD57 310 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 AFF4Q9UHB7 1163 aaKnown RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 FRMPD2Q68DX3 1309 aaPredicted RBP3.34□□□□□ -1.87
CSDE1-208ENST00000524652 WDR19Q8NEZ3 1342 aa3.34□□□□□ -1.87
CSDE1-208ENST00000524652 ALPK3Q96L96 1907 aa3.34□□□□□ -1.88
CSDE1-208ENST00000524652 REV3LO60673 3130 aa3.34□□□□□ -1.88
CSDE1-208ENST00000524652 LAMA3Q16787 3333 aa3.34□□□□□ -1.88
CSDE1-208ENST00000524652 CDH23Q9H251 3354 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 LOXHD1Q8IVV2 1947 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 TRIP12Q14669 1992 aaPredicted RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 KLF18A0A0U1RQI7 1052 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 hCG_1642624A0A1W2PR95 340 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 CD8B2A6NJW9 211 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 AQP7P3A6NL99 342 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 H7C4K7 107 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 CLIC1O00299 241 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 PDHXO00330 501 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 CXCL11O14625 94 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 WDR46O15213 610 aaKnown RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 PIAS2O75928 621 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 PARP1P09874 1014 aaKnown RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 HSPA8P11142 646 aaKnown RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 TOP1P11387 765 aaKnown RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 BRAFP15056 766 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 TACR3P29371 465 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 PDIA3P30101 505 aaKnown RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 HOXA7P31268 230 aaPredicted RBP3.33□□□□□ -1.88
CSDE1-208ENST00000524652 LIFRP42702 1097 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ME1P48163 572 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 THBS3P49746 956 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 GATMP50440 423 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ZNF543Q08ER8 600 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 TRDNQ13061 729 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 STK3Q13188 491 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ARHGEF7Q14155 803 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 KRT32Q14532 448 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 GRM4Q14833 912 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 NPY5RQ15761 445 aa3.33□□□□□ -1.88
CSDE1-208ENST00000524652 ME3Q16798 604 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms