RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 ATP5OP48047 213 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 PGFP49763 221 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 YWHAGP61981 247 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS11-201ENST00000524454 PPP2R2AP63151 447 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 COG7P83436 770 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 RING1Q06587 406 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 DMTNQ08495 405 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 PPIDQ08752 370 aaKnown RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 TAF10Q12962 218 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 NAB1Q13506 487 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 FRG1Q14331 258 aaKnown RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 CA9Q16790 459 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 PPP6R3Q5H9R7 873 aaPredicted RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 MANEALQ5VSG8 457 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 SNX30Q5VWJ9 437 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 SYPL2Q5VXT5 272 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 NAIF1Q69YI7 327 aaPredicted RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 KLHDC10Q6PID8 442 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 LEKR1Q6ZMV7 388 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 DENND5BQ6ZUT9 1274 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 TADA2BQ86TJ2 420 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 FAM131BQ86XD5 332 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 SPATS2Q86XZ4 545 aaKnown RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 MFSD6LQ8IWD5 586 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 UNC45BQ8IWX7 931 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 KLHDC8BQ8IXV7 354 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 FAM71DQ8N9W8 422 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 PDZD8Q8NEN9 1154 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 PJA1Q8NG27 643 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 DQX1Q8TE96 717 aaKnown RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 HTR3CQ8WXA8 447 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 HDAC11Q96DB2 347 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 TRMT2BQ96GJ1 504 aaKnown RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 SPATA13Q96N96 652 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 TSGA13Q96PP4 275 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 TTLL2Q9BWV7 592 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 CAPS2Q9BXY5 557 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 ACSS3Q9H6R3 686 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 WDCPQ9H6R7 721 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 GTSE1Q9NYZ3 720 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 GMIPQ9P107 970 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 UXTQ9UBK9 157 aaPredicted RBP7.24□□□□□ -1.25
VPS11-201ENST00000524454 TLR6Q9Y2C9 796 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 SIT1Q9Y3P8 196 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 PIAS3Q9Y6X2 628 aa7.24□□□□□ -1.25
VPS11-201ENST00000524454 KIAA1549LQ6ZVL6 1849 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 TRAV19A0A0A6YYK7 116 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 KANSL1LA0AUZ9 987 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 OTOL1A6NHN0 477 aaPredicted RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 FAM170BA6NMN3 283 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 ARNTLO00327 626 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 TRDMT1O14717 391 aaKnown RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 KCNN4O15554 427 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CKMP06732 381 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 GOT1P17174 413 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 TFE3P19532 575 aaPredicted RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 STX2P32856 288 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CHKAP35790 457 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 PLA2G5P39877 138 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 MDH1P40925 334 aaKnown RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 PPP3CCP48454 512 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 IFNAR2P48551 515 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 TUBP50607 506 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CLCN5P51795 746 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 GDF10P55107 478 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 STARD6P59095 220 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 TPI1P60174 286 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 ZXDBP98169 803 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 PFKPQ01813 784 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 NHLH1Q02575 133 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 FCHO2Q0JRZ9 810 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 GALNT2Q10471 571 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 ILF2Q12905 390 aaKnown RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 TRIP13Q15645 432 aaPredicted RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 BTBD8Q5XKL5 378 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 NUGGCQ68CJ6 796 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 ITPRIPL1Q6GPH6 555 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 TAC4Q86UU9 113 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CCDC25Q86WR0 208 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CELF5Q8N6W0 485 aaKnown RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 ZNF511Q8NB15 262 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 DTWD2Q8NBA8 298 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 GLIS1Q8NBF1 620 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 BPIFB1Q8TDL5 484 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CSGALNACT1Q8TDX6 532 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 DEPDC1BQ8WUY9 529 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 DNASE1L2Q92874 299 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 IRF7Q92985 503 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 FBXO32Q969P5 355 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 ALKBH8Q96BT7 664 aaKnown RBP7.23□□□□□ -1.25
VPS11-201ENST00000524454 FAM122AQ96E09 287 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 MYRFLQ96LU7 910 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CYTH2Q99418 400 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 DHRS4Q9BTZ2 278 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 RNF38Q9H0F5 515 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 EBF3Q9H4W6 596 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 CATSPERBQ9H7T0 1116 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 SAYSD1Q9NPB0 183 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 LTB4R2Q9NPC1 389 aa7.23□□□□□ -1.25
VPS11-201ENST00000524454 GKN1Q9NS71 199 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms