RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	TMEM130	Q8N3G9	435 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	AFAP1L2	Q8N4X5	818 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	FIBCD1	Q8N539	461 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	PACRGL	Q8N7B6	248 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	ANKRD52	Q8NB46	1076 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	RSPH1	Q8WYR4	309 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	TMIGD2	Q96BF3	282 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	MCMBP	Q9BTE3	642 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	CEP41	Q9BYV8	373 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	UPF3A	Q9H1J1	476 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	SEMA6A	Q9H2E6	1030 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	LRRC4	Q9HBW1	653 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	CASS4	Q9NQ75	786 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	SARDH	Q9UL12	918 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	TRPC5	Q9UL62	973 aa	Predicted RBP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	PAIP2B	Q9ULR5	123 aa	Known RBP	10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	FZD10	Q9ULW2	581 aa		10.42	□□□□□ -0.74
SPIDR-225	ENST00000524141	TRIM64C	A6NLI5	447 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	TTC36	A6NLP5	189 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	AP3B1	O00203	1094 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	HTRA2	O43464	458 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	NPHS1	O60500	1241 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	HSPA8	P11142	646 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	ACADSB	P45954	432 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	FSTL1	Q12841	308 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	CBX3	Q13185	183 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC10A6	Q3KNW5	377 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC44A4	Q53GD3	710 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	DCAF15	Q66K64	600 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	CATSPERG	Q6ZRH7	1159 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZBTB49	Q6ZSB9	765 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	PDZD4	Q76G19	769 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	MYO1H	Q8N1T3	1032 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	TMEM151A	Q8N4L1	468 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	TERB1	Q8NA31	727 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	FAM156A	Q8NDB6	213 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	RNF139	Q8WU17	664 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	SNRNP27	Q8WVK2	155 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	FAR2	Q96K12	515 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	C1QTNF1	Q9BXJ1	281 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	RHOJ	Q9H4E5	214 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	PRDM12	Q9H4Q4	367 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	MINDY3	Q9H8M7	445 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	TBC1D23	Q9NUY8	699 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	NCKIPSD	Q9NZQ3	722 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	RAD54B	Q9Y620	910 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	TRIM24	O15164	1050 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	MAGEB3	O15480	346 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	CLASP2	O75122	1294 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	CSPG5	O95196	566 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	EDNRB	P24530	442 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	HMOX2	P30519	316 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	POLD2	P49005	469 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	NPY2R	P49146	381 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	SLC26A2	P50443	739 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	BCAT1	P54687	386 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	POU5F1B	Q06416	359 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	BST2	Q10589	180 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	SPIDR	Q14159	915 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	PAFAH1B3	Q15102	231 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	MTX3	Q5HYI7	312 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	SAMD4B	Q5PRF9	694 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	MEX3C	Q5U5Q3	659 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	ARHGAP17	Q68EM7	881 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	PPP4R4	Q6NUP7	873 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	GPR180	Q86V85	440 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	NIM1K	Q8IY84	436 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	PYROXD2	Q8N2H3	581 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	ANKFN1	Q8N957	763 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	PPWD1	Q96BP3	646 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	ISOC1	Q96CN7	298 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZNF668	Q96K58	619 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	MARK4	Q96L34	752 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZNF512	Q96ME7	567 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	PHF12	Q96QT6	1004 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	CIB1	Q99828	191 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	MAGEB5	Q9BZ81	275 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	SNX25	Q9H3E2	840 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	BLOC1S6	Q9UL45	172 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	CDH7	Q9ULB5	785 aa		10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	SCAF8	Q9UPN6	1271 aa	Known RBP	10.41	□□□□□ -0.74
SPIDR-225	ENST00000524141	KCNU1	A8MYU2	1149 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	GABBR2	O75899	941 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	BMP2	P12643	396 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	PTPRA	P18433	802 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	DNAJB2	P25686	324 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	KPNA2	P52292	529 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	GTF2A2	P52657	109 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	SQLE	Q14534	574 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	USP10	Q14694	798 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	C16orf72	Q14CZ0	275 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	DGKD	Q16760	1214 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	UGP2	Q16851	508 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	SOWAHA	Q2M3V2	549 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	HSDL1	Q3SXM5	330 aa		10.4	□□□□□ -0.74
SPIDR-225	ENST00000524141	LRRC8E	Q6NSJ5	796 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms