RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 TRAF1Q13077 416 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 ZSCAN26Q16670 478 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 MAP9Q49MG5 647 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 DNAJC21Q5F1R6 531 aaKnown RBP3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 FAXCQ5TGI0 409 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 SUSD4Q5VX71 490 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 ANO7Q6IWH7 933 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 NAA16Q6N069 864 aaPredicted RBP3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 STOX1Q6ZVD7 989 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 TXLNBQ8N3L3 684 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 NECAB1Q8N987 351 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 NCOA7Q8NI08 942 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 TBCBQ99426 244 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 MPHOSPH8Q99549 860 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 SELENOOQ9BVL4 669 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 TSPY26PQ9H489 355 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 SAP30LQ9HAJ7 183 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 ZBTB26Q9HCK0 441 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 VPS45Q9NRW7 570 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 GJB4Q9NTQ9 266 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 TMEM184CQ9NVA4 438 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 ARL8BQ9NVJ2 186 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 GAR1Q9NY12 217 aaKnown RBP3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 MTMR4Q9NYA4 1195 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 CFAP45Q9UL16 551 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 FZD4Q9ULV1 537 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 CNPY2Q9Y2B0 182 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 AFG3L2Q9Y4W6 797 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 PCDHB2Q9Y5E7 798 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 BCL9LQ86UU0 1499 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 MYH1P12882 1939 aa3.64□□□□□ -1.83
LINCR-0001-203ENST00000524047 TNRC6CQ9HCJ0 1690 aaKnown RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 GOLGA6L4A6NEF3 574 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 H3BQV1 296 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 FIBPO43427 364 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 NTSR2O95665 410 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 FGBP02675 491 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 MYL3P08590 195 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ARP10275 920 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 TSHRP16473 764 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 PAX7P23759 505 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 HOXD9P28356 352 aaPredicted RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 CCKBRP32239 447 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ABCD1P33897 745 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 MAP2K2P36507 400 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 PBX1P40424 430 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 MAGEA8P43361 318 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 MAGEA9P43362 315 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 WDR5P61964 334 aaKnown RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ID2Q02363 134 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 MTAPQ13126 283 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 BFSP2Q13515 415 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ITPK1Q13572 414 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 RAPGEF1Q13905 1077 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ACOX1Q15067 660 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ALX1Q15699 326 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 TTC31Q49AM3 519 aaPredicted RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 AASDHQ4L235 1098 aaPredicted RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 KLHL22Q53GT1 634 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 SLC10A5Q5PT55 438 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 SLC9C2Q5TAH2 1124 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ABLIM2Q6H8Q1 611 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 BEND5Q7L4P6 421 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 MRPL10Q7Z7H8 261 aaKnown RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 MB21D2Q8IYB1 491 aaPredicted RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 NRACQ8N912 160 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 SPATA5Q8NB90 893 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ANKRD20A12PQ8NF67 263 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 SUN3Q8TAQ9 357 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 PIGOQ8TEQ8 1089 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 ABHD5Q8WTS1 349 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 TCEANC2Q96MN5 208 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 SIGLEC11Q96RL6 698 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 NYXQ9GZU5 481 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 RANBP17Q9H2T7 1088 aaKnown RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 TMOD4Q9NZQ9 345 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 NIP7Q9Y221 180 aaKnown RBP eCLIP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 LRRC37AA6NMS7 1700 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 PDS5AQ29RF7 1337 aaKnown RBP3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 SALL1Q9NSC2 1324 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 NID2Q14112 1375 aa3.63□□□□□ -1.83
LINCR-0001-203ENST00000524047 COL4A1P02462 1669 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 RGPD3A6NKT7 1758 aaPredicted RBP3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 RGPD4Q7Z3J3 1758 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 CLCA1A8K7I4 914 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 SOCS2O14508 198 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 APOL1O14791 398 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 AREL1O15033 823 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 PMM2O15305 246 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 ZSCAN9O15535 394 aaPredicted RBP3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 PRC1O43663 620 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 IDH1O75874 414 aaKnown RBP3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 CAVIN2O95810 425 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 CBSLP0DN79 551 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 CCDC192P0DO97 292 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 MYL4P12829 197 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 HMGB2P26583 209 aaKnown RBP3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 MST1P26927 711 aa3.62□□□□□ -1.83
LINCR-0001-203ENST00000524047 PDIA3P30101 505 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms