RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 NDE1Q9NXR1 346 aa8□□□□□ -1.13
SPIDR-223ENST00000524033 PPARGC1AQ9UBK2 798 aaKnown RBP8□□□□□ -1.13
SPIDR-223ENST00000524033 SIX4Q9UIU6 781 aa8□□□□□ -1.13
SPIDR-223ENST00000524033 ITGA11Q9UKX5 1188 aa8□□□□□ -1.13
SPIDR-223ENST00000524033 EMCNQ9ULC0 261 aa8□□□□□ -1.13
SPIDR-223ENST00000524033 PPM1HQ9ULR3 514 aa8□□□□□ -1.13
SPIDR-223ENST00000524033 USP18Q9UMW8 372 aa8□□□□□ -1.13
SPIDR-223ENST00000524033 SEC23IPQ9Y6Y8 1000 aaKnown RBP8□□□□□ -1.13
SPIDR-223ENST00000524033 HIDE1A8MVS5 230 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 PRR5-ARHGAP8B1AHC4 643 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 ZNF195O14628 629 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 AP1G1O43747 822 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 GAS2O43903 313 aaKnown RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 UGT1A9O60656 530 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 RNASEH1O60930 286 aaKnown RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CILPO75339 1184 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 USP1O94782 785 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 RTN3O95197 1032 aaPredicted RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CXCL14O95715 111 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 PRKCGP05129 697 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 PRKCBP05771 671 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 FGF3P11487 239 aaPredicted RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 MYL4P12829 197 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 GPD1P21695 349 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 IL4RP24394 825 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CNTFP26441 200 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 NOS2P35228 1153 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 GPD2P43304 727 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 NUMBP49757 651 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CLCN2P51788 898 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 RPS6KA3P51812 740 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 EFNA5P52803 228 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 BCAR1P56945 870 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 AP2B1P63010 937 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 ARHGAP8P85298 464 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 TMPRSS15P98073 1019 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 FOXK2Q01167 660 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 DSG1Q02413 1049 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 LAMTOR4Q0VGL1 99 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 NAB1Q13506 487 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CCNIQ14094 377 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 PDK2Q15119 407 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 KCNT1Q5JUK3 1230 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 MBLAC2Q68D91 279 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 DARS2Q6PI48 645 aaKnown RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 GLB1LQ6UWU2 654 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 TMEM184AQ6ZMB5 413 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 SCARA5Q6ZMJ2 495 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 USP34Q70CQ2 3546 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CATSPER4Q7RTX7 472 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 MAVSQ7Z434 540 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CRLF3Q8IUI8 442 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 ARID3BQ8IVW6 561 aaPredicted RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 ADGRF2Q8IZF7 708 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 PPM1NQ8N819 430 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 KCTD6Q8NC69 237 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 VN1R2Q8NFZ6 395 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 OR6Y1Q8NGX8 325 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 GSDMBQ8TAX9 411 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 SHKBP1Q8TBC3 707 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 STON2Q8WXE9 905 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 RSPH1Q8WYR4 309 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 JADE3Q92613 823 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 ISL2Q96A47 359 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CLPTM1LQ96KA5 538 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 ACAP3Q96P50 834 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 TWNKQ96RR1 684 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 TUBGCP5Q96RT8 1024 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 MRPL9Q9BYD2 267 aaKnown RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 FAM124BQ9H5Z6 455 aaPredicted RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 UGT1A7Q9HAW7 530 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 UGT1A10Q9HAW8 530 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 UGT1A8Q9HAW9 530 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 CYP3A43Q9HB55 503 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 IFT122Q9HBG6 1241 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 PCDH18Q9HCL0 1135 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 XAB2Q9HCS7 855 aaKnown RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 ETNK2Q9NVF9 386 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 THAP1Q9NVV9 213 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 DNAJC28Q9NX36 388 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 SEPT3Q9UH03 358 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 MUTYHQ9UIF7 546 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 SOX13Q9UN79 622 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 PIN4Q9Y237 131 aaKnown RBP7.99□□□□□ -1.13
SPIDR-223ENST00000524033 USP3Q9Y6I4 520 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 IKBKGQ9Y6K9 419 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 DMDP11532 3685 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 TSC2P49815 1807 aa7.99□□□□□ -1.13
SPIDR-223ENST00000524033 EVPLQ92817 2033 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 PTPRSQ13332 1948 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 CCDC195A0A1B0GUA6 201 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 LOC730098B7Z3J9 87 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 NT5C1B-RDH14C9J2C7 533 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 H7C0C1 242 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 CYB561D2O14569 222 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 ST8SIA5O15466 376 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 PEX1O43933 1283 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 MAN1A2O60476 641 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 ZNF623O75123 536 aa7.98□□□□□ -1.13
SPIDR-223ENST00000524033 KRT38O76015 456 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms