RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 PABPC5Q96DU9 382 aaKnown RBP10.95□□□□□ -0.66
SPIDR-222ENST00000524006 SCLYQ96I15 445 aa10.95□□□□□ -0.66
SPIDR-222ENST00000524006 CDX2Q99626 313 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-222ENST00000524006 RBBP8Q99708 897 aa10.95□□□□□ -0.66
SPIDR-222ENST00000524006 DDX50Q9BQ39 737 aaKnown RBP10.95□□□□□ -0.66
SPIDR-222ENST00000524006 TRIM56Q9BRZ2 755 aaKnown RBP10.95□□□□□ -0.66
SPIDR-222ENST00000524006 TTYH1Q9H313 450 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-222ENST00000524006 SLCO1B3Q9NPD5 702 aa10.95□□□□□ -0.66
SPIDR-222ENST00000524006 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
SPIDR-222ENST00000524006 TMEM248Q9NWD8 314 aa10.95□□□□□ -0.66
SPIDR-222ENST00000524006 MPP6Q9NZW5 540 aa10.95□□□□□ -0.66
SPIDR-222ENST00000524006 DNMT3LQ9UJW3 386 aa10.95□□□□□ -0.66
SPIDR-222ENST00000524006 SLC12A4Q9UP95 1085 aa10.95□□□□□ -0.66
SPIDR-222ENST00000524006 PLLPQ9Y342 182 aa10.95□□□□□ -0.66
SPIDR-222ENST00000524006 HBS1LQ9Y450 684 aaKnown RBP10.95□□□□□ -0.66
SPIDR-222ENST00000524006 A0A0G2JND7 137 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 TYW5A2RUC4 315 aaKnown RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 NT5C1B-RDH14C9J2C7 533 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 KLF11O14901 512 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 TLR5O60602 858 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 HNRNPCL1O60812 293 aaKnown RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 H2AFYO75367 372 aaKnown RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 RFPL1O75677 317 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 SOAT2O75908 522 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 HAUS5O94927 633 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 AMHP03971 560 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 HLA-DQB2P05538 268 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 URODP06132 367 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 APOA4P06727 396 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 GALTP07902 379 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 CD68P34810 354 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 CA8P35219 290 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 RFC2P35250 354 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 ALDH1A3P47895 512 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 HARS2P49590 506 aaKnown RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 LIMK2P53671 638 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 SLC12A2P55011 1212 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 MLLT6P55198 1093 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 USP46P62068 366 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 RING1Q06587 406 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 DUSP4Q13115 394 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 STX3Q13277 289 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 LAMB3Q13751 1172 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 MRPL58Q14197 206 aaKnown RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 POLD3Q15054 466 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 PCSK7Q16549 785 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 CCDC153Q494R4 210 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 RTP2Q5QGT7 225 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 CERCAMQ5T4B2 595 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 STXBP5Q5T5C0 1151 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 N4BP2L1Q5TBK1 243 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 MARC1Q5VT66 337 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 KCTD11Q693B1 232 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 PRSS55Q6UWB4 352 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 RAPH1Q70E73 1250 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 OTOP3Q7RTS5 596 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 ARHGAP12Q8IWW6 846 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 LGI2Q8N0V4 545 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 UMODL1-AS1Q8N2C9 162 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 OVCA2Q8WZ82 227 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 KLHL29Q96CT2 875 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 ATXN7L3BQ96GX2 97 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 TMEM169Q96HH4 297 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 ZNF558Q96NG5 402 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 IL12RB2Q99665 862 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 WWP1Q9H0M0 922 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 FAM96AQ9H5X1 160 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 NT5MQ9NPB1 228 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 IARS2Q9NSE4 1012 aaKnown RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 MTRRQ9UBK8 725 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 GGT7Q9UJ14 662 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 DCTN4Q9UJW0 460 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 TLK1Q9UKI8 766 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 ANKRD6Q9Y2G4 727 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 MTO1Q9Y2Z2 717 aaKnown RBP10.94□□□□□ -0.66
SPIDR-222ENST00000524006 CHD7Q9P2D1 2997 aa10.94□□□□□ -0.66
SPIDR-222ENST00000524006 CCDC78A2IDD5 438 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 HEATR9A2RTY3 570 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 C2CD2LO14523 706 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 PRRG1O14668 218 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 MAFKO60675 156 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 DHRS4L1P0CG22 281 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 TPH1P17752 444 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 TACR2P21452 398 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 OR1E1P30953 314 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 ELF1P32519 619 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 ATP5C1P36542 298 aaKnown RBP10.93□□□□□ -0.66
SPIDR-222ENST00000524006 PBX3P40426 434 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 SKIV2L2P42285 1042 aaKnown RBP10.93□□□□□ -0.66
SPIDR-222ENST00000524006 IRX4P78413 519 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 SMAD3P84022 425 aaKnown RBP10.93□□□□□ -0.66
SPIDR-222ENST00000524006 ASPHQ12797 758 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 OVGP1Q12889 678 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 POU6F1Q14863 301 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 INSCQ1MX18 579 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 TMCO4Q5TGY1 634 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 CGB2Q6NT52 195 aa10.93□□□□□ -0.66
SPIDR-222ENST00000524006 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms