RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 BCLAF3A2AJT9 711 aaKnown RBP12.76□□□□□ -0.37
CCNC-216ENST00000523961 GOLGA6L3A6NEY3 463 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 MID1O15344 667 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 SPOPO43791 374 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 PRNPP04156 253 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 CHRNA3P32297 505 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 SERPINB6P35237 376 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 DPP6P42658 865 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 PAPOLAP51003 745 aaKnown RBP12.76□□□□□ -0.37
CCNC-216ENST00000523961 DNA2P51530 1060 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 VAV2P52735 878 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 CREB5Q02930 508 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 DPYSL3Q14195 570 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 INO80DQ53TQ3 878 aaPredicted RBP12.76□□□□□ -0.37
CCNC-216ENST00000523961 CARD16Q5EG05 197 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 LYSMD4Q5XG99 296 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 CYP2U1Q7Z449 544 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 ARHGAP12Q8IWW6 846 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 TXLNBQ8N3L3 684 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 DCLK2Q8N568 766 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 NPWQ8N729 165 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 TMIEQ8NEW7 156 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 CADM4Q8NFZ8 388 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 PIP4K2CQ8TBX8 421 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 ZNF419Q96HQ0 510 aaPredicted RBP12.76□□□□□ -0.37
CCNC-216ENST00000523961 OMDQ99983 421 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 ZNF670Q9BS34 389 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 CALN1Q9BXU9 219 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 TNKS2Q9H2K2 1166 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 GRPEL1Q9HAV7 217 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 SGK2Q9HBY8 427 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 UBA2Q9UBT2 640 aaPredicted RBP12.76□□□□□ -0.37
CCNC-216ENST00000523961 PPM1HQ9ULR3 514 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 FZD4Q9ULV1 537 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 REXO2Q9Y3B8 237 aaKnown RBP12.76□□□□□ -0.37
CCNC-216ENST00000523961 ACTL7AQ9Y615 435 aa12.76□□□□□ -0.37
CCNC-216ENST00000523961 A0A1W2PP55 124 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 BTNL10A8MVZ5 291 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 DFFAO00273 331 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 BUB1BO60566 1050 aaPredicted RBP12.75□□□□□ -0.37
CCNC-216ENST00000523961 PRAMEF11O60813 436 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 ZNF821O75541 412 aaPredicted RBP12.75□□□□□ -0.37
CCNC-216ENST00000523961 RNASEH2AO75792 299 aaKnown RBP12.75□□□□□ -0.37
CCNC-216ENST00000523961 TMCC1O94876 653 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 GSRP00390 522 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 CD48P09326 243 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 COMTP21964 271 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 IL4RP24394 825 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 ACSL1P33121 698 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 MPLP40238 635 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 PTGER3P43115 390 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 SNRPD1P62314 119 aaKnown RBP12.75□□□□□ -0.37
CCNC-216ENST00000523961 SPEM2Q0P670 501 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 MMRN1Q13201 1228 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 SYCP2LQ5T4T6 812 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 THADAQ6YHU6 1953 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 LEKR1Q6ZMV7 388 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 DPY19L3Q6ZPD9 716 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 ARMCX6Q7L4S7 300 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 RHOT1Q8IXI2 618 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 HDDC3Q8N4P3 179 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 DEFB119Q8N690 84 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 ACRBPQ8NEB7 543 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 HSPA12BQ96MM6 686 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 HEPHQ9BQS7 1158 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 TM6SF2Q9BZW4 377 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 SP110Q9HB58 689 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 ETNK2Q9NVF9 386 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 KLHL11Q9NVR0 708 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 IL36AQ9UHA7 158 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 SARDHQ9UL12 918 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 TFR2Q9UP52 801 aa12.75□□□□□ -0.37
CCNC-216ENST00000523961 NUP205Q92621 2012 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 LRRD1A4D1F6 860 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 RCCD1A6NED2 376 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 ZNF487B1APH4 448 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 J3KR12 359 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 PJA2O43164 708 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 FOXD2O60548 495 aaPredicted RBP12.74□□□□□ -0.37
CCNC-216ENST00000523961 SEMA4FO95754 770 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 CTSLP07711 333 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 KDELR1P24390 212 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 HOXD12P35452 270 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 CCNHP51946 323 aaPredicted RBP12.74□□□□□ -0.37
CCNC-216ENST00000523961 RHOAP61586 193 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 IL10RBQ08334 325 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 CCDC15Q0P6D6 951 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 CSRP2Q16527 193 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 ODF2Q5BJF6 829 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 ANKRD20A8PQ5CZ79 823 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 WDR45BQ5MNZ6 344 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 C11orf63Q6NUN7 778 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 VSIG1Q86XK7 387 aa12.74□□□□□ -0.37
CCNC-216ENST00000523961 LRRC49Q8IUZ0 686 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms