RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 MS4A13Q5J8X5 152 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 MPP7Q5T2T1 576 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 NUGGCQ68CJ6 796 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 NAXDQ8IW45 347 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 MFN1Q8IWA4 741 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 DHX40Q8IX18 779 aaKnown RBP8.29□□□□□ -1.08
PVT1-213ENST00000522414 TP53INP2Q8IXH6 220 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 APCDD1Q8J025 514 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 AHI1Q8N157 1196 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 WDTC1Q8N5D0 677 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 DQX1Q8TE96 717 aaKnown RBP8.29□□□□□ -1.08
PVT1-213ENST00000522414 GANCQ8TET4 914 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 WFIKKN2Q8TEU8 576 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 ZNF606Q8WXB4 792 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 GOLGA1Q92805 767 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 TTC17Q96AE7 1141 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 FAM149B1Q96BN6 582 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 SLC39A13Q96H72 371 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 CALR3Q96L12 384 aaKnown RBP8.29□□□□□ -1.08
PVT1-213ENST00000522414 MRGPRX3Q96LB0 322 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 PRICKLE1Q96MT3 831 aaPredicted RBP8.29□□□□□ -1.08
PVT1-213ENST00000522414 MED15Q96RN5 788 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 ORAI3Q9BRQ5 295 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 OSBPL1AQ9BXW6 950 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 ZDHHC5Q9C0B5 715 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 INTS2Q9H0H0 1204 aaKnown RBP8.29□□□□□ -1.08
PVT1-213ENST00000522414 TM7SF3Q9NS93 570 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 TJP2Q9UDY2 1190 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 SERGEFQ9UGK8 458 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 SUN2Q9UH99 717 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 PCOLCE2Q9UKZ9 415 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 CNTN6Q9UQ52 1028 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 TLR6Q9Y2C9 796 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 BTBD3Q9Y2F9 522 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.29□□□□□ -1.08
PVT1-213ENST00000522414 NFE2L3Q9Y4A8 694 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.29□□□□□ -1.08
PVT1-213ENST00000522414 ASXL3Q9C0F0 2248 aa8.29□□□□□ -1.08
PVT1-213ENST00000522414 FAM221BA6H8Z2 402 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 E5RJQ4 531 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 H0Y626 953 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 CAPN9O14815 690 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 WNT9AO14904 365 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 IRAK2O43187 625 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 THAP12O43422 761 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 FBXO21O94952 628 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 TRIM16O95361 564 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 GNA14O95837 355 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 DNTTP04053 509 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 CAPNS1P04632 268 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 ATXN1LP0C7T5 689 aaKnown RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 FTH1P19P0C7X4 201 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 RDXP35241 583 aaKnown RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 ADMP35318 185 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 USP8P40818 1118 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 MATKP42679 507 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 AFF3P51826 1226 aaKnown RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 GALCP54803 685 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 ZNF445P59923 1031 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 YWHAZP63104 245 aaKnown RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 STILQ15468 1287 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 ARHGAP44Q17R89 818 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 ZNF423Q2M1K9 1284 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 C9orf64Q5T6V5 341 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 RAP1GAP2Q684P5 730 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 DBX2Q6ZNG2 339 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 TMEM110Q86TL2 294 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 TAC4Q86UU9 113 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 MMAAQ8IVH4 418 aaKnown RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 LGI2Q8N0V4 545 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 HJURPQ8NCD3 748 aaPredicted RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 ADAMTS14Q8WXS8 1223 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 ZCCHC14Q8WYQ9 949 aaKnown RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 RPL10LQ96L21 214 aaKnown RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 FAM129BQ96TA1 746 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 BTBD1Q9H0C5 482 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 RSPH9Q9H1X1 276 aaPredicted RBP8.28□□□□□ -1.08
PVT1-213ENST00000522414 NEUROG2Q9H2A3 272 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 EBF2Q9HAK2 575 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 TM9SF3Q9HD45 589 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 FBXL12Q9NXK8 326 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 TMEM63CQ9P1W3 806 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 ERVW-1Q9UQF0 538 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 ANKRD6Q9Y2G4 727 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 APC2O95996 2303 aa8.28□□□□□ -1.08
PVT1-213ENST00000522414 SYNJ2BP-COX16A0A087WUM0 186 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 A0A1W2PP55 124 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 FAM170AA1A519 330 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 BICDL2A1A5D9 508 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 BECN2A8MW95 431 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 H0Y8X5 98 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 MID1O15344 667 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 GRAP2O75791 330 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 TRUB2O95900 331 aaKnown RBP8.27□□□□□ -1.09
PVT1-213ENST00000522414 IGHV4-34P06331 123 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 VAV1P15498 845 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 TACR2P21452 398 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 CD27P26842 260 aa8.27□□□□□ -1.09
PVT1-213ENST00000522414 MZF1P28698 734 aaPredicted RBP8.27□□□□□ -1.09
PVT1-213ENST00000522414 SLC8A1P32418 973 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms