RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 UBA7P41226 1012 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 CASP4P49662 377 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 STK19P49842 368 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 HNRNPKP61978 463 aaKnown RBP eCLIP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 EIF3IQ13347 325 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 SPIDRQ14159 915 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 LBRQ14739 615 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 PSMD6Q15008 389 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 NR0B2Q15466 257 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 FAM133BQ5BKY9 247 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 MPP7Q5T2T1 576 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 ARL6IP4Q66PJ3 421 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 OR6B2Q6IFH4 312 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 DSG4Q86SJ6 1040 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 ATCAYQ86WG3 371 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 VWA5B2Q8N398 1253 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 C9orf43Q8TAL5 461 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 FRS2Q8WU20 508 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 USP7Q93009 1102 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 CALML4Q96GE6 196 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 PPP1R13BQ96KQ4 1090 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 RPL10LQ96L21 214 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 CDK5RAP1Q96SZ6 601 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 TCEAL2Q9H3H9 227 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 OLFML3Q9NRN5 406 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 SEPT10Q9P0V9 454 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 SCHIP1Q9P0W5 487 aaPredicted RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 SFMBT1Q9UHJ3 866 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 ZFR2Q9UPR6 939 aaKnown RBP9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 DAAM1Q9Y4D1 1078 aa9.15□□□□□ -0.94
TRAPPC9-212ENST00000521944 NYNRINQ9P2P1 1898 aaKnown RBP9.15□□□□□ -0.95
TRAPPC9-212ENST00000521944 TRPM6Q9BX84 2022 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 UBE4BO95155 1302 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 SPTY2D1-AS1A0A0U1RR47 76 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 A0A1W2PQ27 194 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 A0A1W2PQ64 194 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 A0A1W2PQC6 194 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 A0A1W2PQU0 124 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 D6RAR5 112 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 TPP1O14773 563 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 AQP9O43315 295 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 NR1D1P20393 614 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 CCKBRP32239 447 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 NUMBP49757 651 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 ST8SIA6P61647 398 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 RPS24P62847 133 aaKnown RBP9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 CCL7P80098 99 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 ZFP36L1Q07352 338 aaKnown RBP9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 CYP24A1Q07973 514 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 FGL2Q14314 439 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 ELAVL3Q14576 367 aaKnown RBP9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 SNRNP35Q16560 246 aaKnown RBP9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 PITRM1Q5JRX3 1037 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 PIP5KL1Q5T9C9 394 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 NADSYN1Q6IA69 706 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 MAMDC2Q7Z304 686 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 APCDD1Q8J025 514 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 SYAP1Q96A49 352 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 CYFIP2Q96F07 1278 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 AK8Q96MA6 479 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 PRICKLE1Q96MT3 831 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 NCKIPSDQ9NZQ3 722 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 STRIP2Q9ULQ0 834 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 PPM1HQ9ULR3 514 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 LOXL2Q9Y4K0 774 aa9.14□□□□□ -0.95
TRAPPC9-212ENST00000521944 PRR19A6NJB7 356 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 KIAA0391O15091 583 aaKnown RBP9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 RAD51BO15315 384 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 NKX2-8O15522 239 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 TGFB1I1O43294 461 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 MSI1O43347 362 aaKnown RBP9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 ASLP04424 464 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 SRPRAP08240 638 aaKnown RBP9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 SLFN14P0C7P3 912 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 GAP43P17677 238 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 ITGB7P26010 798 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 ASPAP45381 313 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 ZNF445P59923 1031 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 YWHAGP61981 247 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 ECT2LQ008S8 904 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 EIF2B5Q13144 721 aaKnown RBP9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 TRPC3Q13507 836 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 ZNF699Q32M78 642 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 ZNF667Q5HYK9 610 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 RAB41Q5JT25 222 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 SEL1L3Q68CR1 1132 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 TMPRSS9Q7Z410 1059 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 MFN1Q8IWA4 741 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 RBFAQ8N0V3 343 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 WDR48Q8TAF3 677 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 LMX1AQ8TE12 382 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 NKD1Q969G9 470 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 PMEPA1Q969W9 287 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 DUSP16Q9BY84 665 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 CUEDC1Q9NWM3 386 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 STIM2Q9P246 746 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 PADI4Q9UM07 663 aa9.13□□□□□ -0.95
TRAPPC9-212ENST00000521944 LATS1O95835 1130 aa9.12□□□□□ -0.95
TRAPPC9-212ENST00000521944 IGLV3-27P01718 113 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms