RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 CCDC114Q96M63 670 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 EPAS1Q99814 870 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 GPATCH2LQ9NWQ4 482 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 PCSK1NQ9UHG2 260 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 FCF1Q9Y324 198 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 SCINQ9Y6U3 715 aa18.25■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3DA0A087WVF3 549 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3IA0A087WXS9 549 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 A0A087X0T9 212 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3EA0A087X179 549 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3KA0A087X1G2 549 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 CXorf51AA0A1B0GTR3 108 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 A0A1B0GVT2 93 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3FA6NER0 549 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 WASH4PA8MWX3 477 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 UPK3BL1B0FP48 263 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3LB9A6J9 549 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 UPK3BL2E5RIL1 263 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 KDELR3O43731 214 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3HP0C7X1 549 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 FAM228BP0C875 321 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 CD59P13987 128 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 CA9Q16790 459 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 ARSIQ5FYB1 569 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 AGBL4Q5VU57 503 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3GQ6DHY5 549 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3CQ6IPX1 549 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 PIP4P1Q86T03 277 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 VPS36Q86VN1 386 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 TBC1D3Q8IZP1 549 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 PCDH20Q8N6Y1 951 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 DEFB124Q8NES8 71 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 PEBP4Q96S96 227 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 MRPL47Q9HD33 250 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 AP4E1Q9UPM8 1137 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 PLXNA2O75051 1894 aa18.24■□□□□ 0.51
TRAPPC9-211ENST00000521700 KPNA3O00505 521 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 PLRG1O43660 514 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 RNF8O76064 485 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 PRNPP04156 253 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 TPM3P06753 285 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 CEACAM1P13688 526 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 MIPP30301 263 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 RECQLP46063 649 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 GRIA4P48058 902 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 DNA2P51530 1060 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 KIF19Q2TAC6 998 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 HLA-BQ31612 363 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 CARD16Q5EG05 197 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 ERMARDQ5T6L9 678 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 LEKR1Q6ZMV7 388 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 ARRDC3Q96B67 414 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 SNRNP25Q9BV90 132 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 KLC2Q9H0B6 622 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 KDM4CQ9H3R0 1056 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 DHX35Q9H5Z1 703 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 CATSPERBQ9H7T0 1116 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 IL21RQ9HBE5 538 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 ARHGAP20Q9P2F6 1191 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 IL36AQ9UHA7 158 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 HPCAL4Q9UM19 191 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 WASF2Q9Y6W5 498 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 KNL1Q8NG31 2342 aa18.23■□□□□ 0.51
TRAPPC9-211ENST00000521700 PCNX2A6NKB5 2137 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 LRCH4O75427 683 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 YBEYP58557 167 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 TAS2R38P59533 333 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 PPP2CBP62714 309 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 RACK1P63244 317 aaKnown RBP18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 PPP2CAP67775 309 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 SLC14A1Q13336 389 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 TEAD4Q15561 434 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 NFKBIBQ15653 356 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 KCNT1Q5JUK3 1230 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 PIP5KL1Q5T9C9 394 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 IL27RAQ6UWB1 636 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 LAYNQ6UX15 382 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 CYP4V2Q6ZWL3 525 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 UMODL1-AS1Q8N2C9 162 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 RNF214Q8ND24 703 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 GRIN3AQ8TCU5 1115 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 ISG20Q96AZ6 181 aaKnown RBP18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 SLC6A18Q96N87 628 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 HEPHQ9BQS7 1158 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 THAP2Q9H0W7 228 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 GAREM1Q9H706 876 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 ANKRD6Q9Y2G4 727 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 SNX11Q9Y5W9 270 aa18.22■□□□□ 0.51
TRAPPC9-211ENST00000521700 RASA4BC9J798 803 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 WNT9AO14904 365 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 FGF10O15520 208 aaPredicted RBP18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 RASA4O43374 803 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 LATO43561 262 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 BUB1O43683 1085 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 PRPSAP2O60256 369 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 LEFTY1O75610 366 aa18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 HNRNPH3P31942 346 aaKnown RBP18.21■□□□□ 0.51
TRAPPC9-211ENST00000521700 HTR7P34969 479 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms