RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 ERP27Q96DN0 273 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 PABPC5Q96DU9 382 aaKnown RBP10.95□□□□□ -0.66
SPIDR-204ENST00000517824 SCLYQ96I15 445 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 CDX2Q99626 313 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-204ENST00000517824 RBBP8Q99708 897 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 DDX50Q9BQ39 737 aaKnown RBP10.95□□□□□ -0.66
SPIDR-204ENST00000517824 TRIM56Q9BRZ2 755 aaKnown RBP10.95□□□□□ -0.66
SPIDR-204ENST00000517824 TTYH1Q9H313 450 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-204ENST00000517824 SLCO1B3Q9NPD5 702 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
SPIDR-204ENST00000517824 TMEM248Q9NWD8 314 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 MPP6Q9NZW5 540 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 DNMT3LQ9UJW3 386 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 SLC12A4Q9UP95 1085 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 PLLPQ9Y342 182 aa10.95□□□□□ -0.66
SPIDR-204ENST00000517824 HBS1LQ9Y450 684 aaKnown RBP10.95□□□□□ -0.66
SPIDR-204ENST00000517824 A0A0G2JND7 137 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 TYW5A2RUC4 315 aaKnown RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 NT5C1B-RDH14C9J2C7 533 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 KLF11O14901 512 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 TLR5O60602 858 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 HNRNPCL1O60812 293 aaKnown RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 H2AFYO75367 372 aaKnown RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 RFPL1O75677 317 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 SOAT2O75908 522 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 HAUS5O94927 633 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 AMHP03971 560 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 HLA-DQB2P05538 268 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 URODP06132 367 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 APOA4P06727 396 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 GALTP07902 379 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 CD68P34810 354 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 CA8P35219 290 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 RFC2P35250 354 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 ALDH1A3P47895 512 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 HARS2P49590 506 aaKnown RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 LIMK2P53671 638 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 SLC12A2P55011 1212 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 MLLT6P55198 1093 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 USP46P62068 366 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 RING1Q06587 406 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 DUSP4Q13115 394 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 STX3Q13277 289 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 LAMB3Q13751 1172 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 MRPL58Q14197 206 aaKnown RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 POLD3Q15054 466 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 PCSK7Q16549 785 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 CCDC153Q494R4 210 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 RTP2Q5QGT7 225 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 CERCAMQ5T4B2 595 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 STXBP5Q5T5C0 1151 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 N4BP2L1Q5TBK1 243 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 MARC1Q5VT66 337 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 KCTD11Q693B1 232 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 PRSS55Q6UWB4 352 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 RAPH1Q70E73 1250 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 OTOP3Q7RTS5 596 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 ARHGAP12Q8IWW6 846 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 LGI2Q8N0V4 545 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 UMODL1-AS1Q8N2C9 162 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 OVCA2Q8WZ82 227 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 KLHL29Q96CT2 875 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 ATXN7L3BQ96GX2 97 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 TMEM169Q96HH4 297 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 ZNF558Q96NG5 402 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 IL12RB2Q99665 862 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 WWP1Q9H0M0 922 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 FAM96AQ9H5X1 160 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 NT5MQ9NPB1 228 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 IARS2Q9NSE4 1012 aaKnown RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 MTRRQ9UBK8 725 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 GGT7Q9UJ14 662 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 DCTN4Q9UJW0 460 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 TLK1Q9UKI8 766 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 ANKRD6Q9Y2G4 727 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 MTO1Q9Y2Z2 717 aaKnown RBP10.94□□□□□ -0.66
SPIDR-204ENST00000517824 CHD7Q9P2D1 2997 aa10.94□□□□□ -0.66
SPIDR-204ENST00000517824 CCDC78A2IDD5 438 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 HEATR9A2RTY3 570 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 C2CD2LO14523 706 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 PRRG1O14668 218 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 MAFKO60675 156 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 DHRS4L1P0CG22 281 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 TPH1P17752 444 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 TACR2P21452 398 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 OR1E1P30953 314 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 ELF1P32519 619 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 ATP5C1P36542 298 aaKnown RBP10.93□□□□□ -0.66
SPIDR-204ENST00000517824 PBX3P40426 434 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 SKIV2L2P42285 1042 aaKnown RBP10.93□□□□□ -0.66
SPIDR-204ENST00000517824 IRX4P78413 519 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 SMAD3P84022 425 aaKnown RBP10.93□□□□□ -0.66
SPIDR-204ENST00000517824 ASPHQ12797 758 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 OVGP1Q12889 678 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 POU6F1Q14863 301 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 INSCQ1MX18 579 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 TMCO4Q5TGY1 634 aa10.93□□□□□ -0.66
SPIDR-204ENST00000517824 CGB2Q6NT52 195 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms