RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 STXBP5Q5T5C0 1151 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 TPGS2Q68CL5 300 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 FAM117BQ6P1L5 589 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 TMCO2Q7Z6W1 182 aaPredicted RBP26.97■■□□□ 1.91
COL13A1-210ENST00000517713 TRIM42Q8IWZ5 723 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 SLC39A11Q8N1S5 342 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 FITM2Q8N6M3 262 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 NSMCE1Q8WV22 266 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 TMEM169Q96HH4 297 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 ZNF778Q96MU6 729 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 KLHL5Q96PQ7 755 aa26.97■■□□□ 1.91
COL13A1-210ENST00000517713 F5H5T6 163 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 TROVE2P10155 538 aaKnown RBP eCLIP26.96■■□□□ 1.91
COL13A1-210ENST00000517713 HMGA1P17096 107 aaKnown RBP26.96■■□□□ 1.91
COL13A1-210ENST00000517713 POU6F1Q14863 301 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 HECTD3Q5T447 861 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 POTEHQ6S545 545 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 RANBP10Q6VN20 620 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 KYAT3Q6YP21 454 aaKnown RBP26.96■■□□□ 1.91
COL13A1-210ENST00000517713 LGI2Q8N0V4 545 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 ATP2A3Q93084 1043 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 MECRQ9BV79 373 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 CYP4F11Q9HBI6 524 aa26.96■■□□□ 1.91
COL13A1-210ENST00000517713 IARS2Q9NSE4 1012 aaKnown RBP26.96■■□□□ 1.91
COL13A1-210ENST00000517713 ACSL4O60488 711 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 GJB5O95377 273 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 TOP3BO95985 862 aaKnown RBP26.95■■□□□ 1.91
COL13A1-210ENST00000517713 YBEYP58557 167 aaPredicted RBP26.95■■□□□ 1.91
COL13A1-210ENST00000517713 ITKQ08881 620 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 GALNTL6Q49A17 601 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 PDPK2PQ6A1A2 396 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 TEX26Q8N6G2 289 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 PPHLN1Q8NEY8 458 aaKnown RBP26.95■■□□□ 1.91
COL13A1-210ENST00000517713 C10orf82Q8WW14 230 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 IMP4Q96G21 291 aaKnown RBP26.95■■□□□ 1.91
COL13A1-210ENST00000517713 NPHS2Q9NP85 383 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 DCDC2Q9UHG0 476 aa26.95■■□□□ 1.91
COL13A1-210ENST00000517713 CCDC78A2IDD5 438 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 GLRA3O75311 464 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 TYK2P29597 1187 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 LIMK2P53671 638 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 WNT3AP56704 352 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 IL10RBQ08334 325 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 SERINC3Q13530 473 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 KDELC1Q6UW63 502 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 DCLK2Q8N568 766 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 HERC2P3Q9BVR0 1158 aa26.95■■□□□ 1.9
COL13A1-210ENST00000517713 H0YHG0 523 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 COCHO43405 550 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 ALDH1A3P47895 512 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 HARS2P49590 506 aaKnown RBP26.94■■□□□ 1.9
COL13A1-210ENST00000517713 DEFB103AP81534 67 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 OVGP1Q12889 678 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 C5orf22Q49AR2 442 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 KLHDC10Q6PID8 442 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 KDELC2Q7Z4H8 507 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 NUDCD3Q8IVD9 361 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 AZIN2Q96A70 460 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 TRPM5Q9NZQ8 1165 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 SIRPGQ9P1W8 387 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 LTBP2Q14767 1821 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 BIRC5O15392 142 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 IL1BP01584 269 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 ALDH3A1P30838 453 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 SLC6A4P31645 630 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 SLC11A2P49281 568 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 CSE1LP55060 971 aaKnown RBP26.94■■□□□ 1.9
COL13A1-210ENST00000517713 MAXP61244 160 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 TNK2Q07912 1038 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 CCDC15Q0P6D6 951 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 PCSK7Q16549 785 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 FSTL4Q6MZW2 842 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 PTCD2Q8WV60 388 aaKnown RBP26.94■■□□□ 1.9
COL13A1-210ENST00000517713 ISL2Q96A47 359 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 MYRFLQ96LU7 910 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 ATXN3LQ9H3M9 355 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 RC3H2Q9HBD1 1191 aaKnown RBP26.94■■□□□ 1.9
COL13A1-210ENST00000517713 TCAF1Q9Y4C2 921 aa26.94■■□□□ 1.9
COL13A1-210ENST00000517713 BPGMP07738 259 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 BTG3Q14201 252 aaPredicted RBP26.93■■□□□ 1.9
COL13A1-210ENST00000517713 TAF12Q16514 161 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 RFWD3Q6PCD5 774 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 CFAP52Q8N1V2 620 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 ZNF398Q8TD17 642 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 E2F7Q96AV8 911 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 ATXN7L3BQ96GX2 97 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 ZNF333Q96JL9 665 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 MRM3Q9HC36 420 aaKnown RBP26.93■■□□□ 1.9
COL13A1-210ENST00000517713 SNX15Q9NRS6 342 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 NSMCE4AQ9NXX6 385 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 YIPF1Q9Y548 306 aa26.93■■□□□ 1.9
COL13A1-210ENST00000517713 GOLGA8TH3BQL2 631 aa26.92■■□□□ 1.9
COL13A1-210ENST00000517713 ACVRL1P37023 503 aa26.92■■□□□ 1.9
COL13A1-210ENST00000517713 CD86P42081 329 aa26.92■■□□□ 1.9
COL13A1-210ENST00000517713 SERPINB8P50452 374 aa26.92■■□□□ 1.9
COL13A1-210ENST00000517713 N4BP2L1Q5TBK1 243 aaPredicted RBP26.92■■□□□ 1.9
COL13A1-210ENST00000517713 ATG16L1Q676U5 607 aa26.92■■□□□ 1.9
COL13A1-210ENST00000517713 VPS45Q9NRW7 570 aa26.92■■□□□ 1.9
COL13A1-210ENST00000517713 TIMM44O43615 452 aa26.92■■□□□ 1.9
COL13A1-210ENST00000517713 DNAJC8O75937 253 aaPredicted RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms