RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 TMIEQ8NEW7 156 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 OR13H1Q8NG92 308 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 OR4C6Q8NH72 309 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 PGAP3Q96FM1 320 aaPredicted RBP8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 HDAC8Q9BY41 377 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 TKTL2Q9H0I9 626 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 SIK2Q9H0K1 926 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 FZD3Q9NPG1 666 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 GPR27Q9NS67 375 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 ZNF212Q9UDV6 495 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 VPS51Q9UID3 782 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 RWDD2AQ9UIY3 292 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 U3KQA8 63 aa8.55□□□□□ -1.04
CTNNA1-203ENST00000517534 IGLV3-10A0A075B6K4 115 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 GTPBP10A4D1E9 387 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 EIF4E1BA6NMX2 242 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 TK2O00142 265 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 KPNA3O00505 521 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 ATXN7O15265 892 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 FGFR1OPO95684 399 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 RHOCP08134 193 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 PNMA6AP0CW24 399 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 CKMT1AP12532 417 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 MYF5P13349 255 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 GABRB2P47870 512 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 KRT83P78385 493 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 TLE3Q04726 772 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 PTK2Q05397 1052 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 FGL2Q14314 439 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 EXOC3L4Q17RC7 722 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 TMEM259Q4ZIN3 620 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 ARSIQ5FYB1 569 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 BRMS1LQ5PSV4 323 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 SEL1L3Q68CR1 1132 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 GCNT7Q6ZNI0 430 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 DPY19L3Q6ZPD9 716 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 ERN2Q76MJ5 926 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 BNIPLQ7Z465 357 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 FAM71AQ8IYT1 594 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 DCAF4L2Q8NA75 395 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 LSM14AQ8ND56 463 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 OR7D4Q8NG98 312 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 PTCD2Q8WV60 388 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 VOPP1Q96AW1 172 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 BMFQ96LC9 184 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 C1orf74Q96LT6 269 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 MYOCQ99972 504 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 C2orf49Q9BVC5 232 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 MUC3BQ9H195 1237 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 TNKS2Q9H2K2 1166 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 WDCPQ9H6R7 721 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 PLCB1Q9NQ66 1216 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 TMPRSS4Q9NRS4 437 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 RRN3Q9NYV6 651 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 MPP6Q9NZW5 540 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 DNAJC12Q9UKB3 198 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 PCDHB1Q9Y5F3 818 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 HS3ST3A1Q9Y663 406 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 TENM4Q6N022 2769 aa8.54□□□□□ -1.04
CTNNA1-203ENST00000517534 ILVBLA1L0T0 632 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 SCAMP1O15126 338 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 FFAR2O15552 330 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 RRP8O43159 456 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 OPA1O60313 960 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 LEFTY1O75610 366 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 CD160O95971 181 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 PRNPP04156 253 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 HNRNPA2B1P22626 353 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 AKT2P31751 481 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 CDH5P33151 784 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 KRT9P35527 623 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 ACTN2P35609 894 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 RNASE9P60153 205 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 DAB2P98082 770 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 CCDC173Q0VFZ6 552 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 SLC25A52Q3SY17 297 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 ZNF542PQ5EBM4 170 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 TRNP1Q6NT89 227 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 C22orf39Q6P5X5 142 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 LINGO4Q6UY18 593 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 KDM7AQ6ZMT4 941 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 Q6ZSR6 202 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 TMC6Q7Z403 805 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 SETD3Q86TU7 594 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 ZDHHC17Q8IUH5 632 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 SPACA3Q8IXA5 215 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 FAM181AQ8N9Y4 354 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 BAP1Q92560 729 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 IFT43Q96FT9 208 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 HIC2Q96JB3 615 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 FCRL3Q96P31 734 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 TBCBQ99426 244 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 CALN1Q9BXU9 219 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 KIAA1468Q9P260 1216 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 FADS3Q9Y5Q0 445 aa8.53□□□□□ -1.04
CTNNA1-203ENST00000517534 PIEZO2Q9H5I5 2752 aa8.52□□□□□ -1.05
CTNNA1-203ENST00000517534 A0A1W2PNU3 283 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-203ENST00000517534 POM121BA6NF01 834 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms