RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PPP4R4Q6NUP7 873 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 OSBPL11Q9BXB4 747 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 EHD3Q9NZN3 535 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 VTI1BQ9UEU0 232 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 STOML2Q9UJZ1 356 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 FBXO10Q9UK96 956 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 USP18Q9UMW8 372 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 LYNP07948 512 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PTPN1P18031 435 aaKnown RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 HDCP19113 662 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 SERPINA4P29622 427 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 OR1E1P30953 314 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PLIN5Q00G26 463 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PLCL1Q15111 1095 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 NRF1Q16656 503 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ABRAXAS1Q6UWZ7 409 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 CTU1Q7Z7A3 348 aaKnown RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM131BQ86XD5 332 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 SNX32Q86XE0 403 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 EID3Q8N140 333 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 PSMA8Q8TAA3 256 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ATP6V1HQ9UI12 483 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 TIMM13Q9Y5L4 95 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 AP4B1Q9Y6B7 739 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 SDR42E2A6NKP2 422 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 BTN3A3O00478 584 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 NR5A2O00482 541 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 GUCA1CO95843 209 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 ZNF12P17014 697 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 SLC1A6P48664 564 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 TUBA1BP68363 451 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 POU4F1Q01851 419 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 SPIDRQ14159 915 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 TUBA1AQ71U36 451 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 MAB21L3Q8N8X9 362 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 KCTD14Q9BQ13 255 aaPredicted RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 CCDC3Q9BQI4 270 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 CLK4Q9HAZ1 481 aaKnown RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 KCNMB3Q9NPA1 279 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 DNAAF2Q9NVR5 837 aaKnown RBP12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 TBC1D14Q9P2M4 693 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 RPS6KL1Q9Y6S9 549 aa12.42□□□□□ -0.42
PCDHGA6-201ENST00000517434 C15orf38-AP3S2A0A0A6YYH1 394 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 FZD9O00144 591 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 WEE1P30291 646 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 NR2C2P49116 596 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 CCT8P50990 548 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ADIGQ0VDE8 80 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 CCDC157Q569K6 752 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 DENND5AQ6IQ26 1287 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ARPINQ7Z6K5 226 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 RGL4Q8IZJ4 473 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 C8orf59Q8N0T1 100 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 SCAIQ8N9R8 606 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 CYP2W1Q8TAV3 490 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 TSR3Q9UJK0 312 aaKnown RBP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 CCDC182A6NF36 153 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 MGRN1O60291 552 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ATG7O95352 703 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ELNP15502 786 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 MSH3P20585 1137 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ADRA1DP25100 572 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 CD52P31358 61 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 AUHQ13825 339 aaKnown RBP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 CLEC16AQ2KHT3 1053 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 SMTNL2Q2TAL5 461 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ATP6AP1LQ52LC2 224 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 GPR107Q5VW38 600 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 PALB2Q86YC2 1186 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 RNF148Q8N7C7 305 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM13CQ8NE31 585 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ZNF606Q8WXB4 792 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 COPS5Q92905 334 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 GANQ9H2C0 597 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 RERGLQ9H628 205 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 MOV10Q9HCE1 1003 aaKnown RBP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM105AQ9NUU6 356 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 SMPD4Q9NXE4 827 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 TRIM43BA6NCK2 446 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 DDX3XO00571 662 aaKnown RBP eCLIP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 CSDE1O75534 798 aaKnown RBP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 AKAP3O75969 853 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 SGPL1O95470 568 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ADH1CP00326 375 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 INHAP05111 366 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 MZF1P28698 734 aaPredicted RBP12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 PRKAA2P54646 552 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 BCL2L1Q07817 233 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 EPC2Q52LR7 807 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 KAT2BQ92831 832 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ZNF333Q96JL9 665 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 PGLYRP2Q96PD5 576 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 SEPHS2Q99611 448 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 TTPALQ9BTX7 342 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 APOL5Q9BWW9 433 aa12.41□□□□□ -0.42
PCDHGA6-201ENST00000517434 ING4Q9UNL4 249 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms