RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CTDNEP1O95476 244 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ELFN1P0C7U0 828 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 PIRTP0C851 137 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ELK3P41970 407 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 FLT3LGP49771 235 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ARF5P84085 180 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 EPS8Q12929 822 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 NDUFAF6Q330K2 333 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 XKR6Q5GH73 641 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 MCOLN2Q8IZK6 566 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ING5Q8WYH8 240 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 C6orf62Q9GZU0 229 aaPredicted RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 CCDC167Q9P0B6 97 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ASF1AQ9Y294 204 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 NR2C2P49116 596 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 RARRES1P49788 294 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 OAZ1P54368 228 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 SMAD3P84022 425 aaKnown RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ZNF268Q14587 947 aaPredicted RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 KCNT2Q6UVM3 1135 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 NKX2-3Q8TAU0 364 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 MAGEB18Q96M61 343 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 CDC42EP4Q9H3Q1 356 aaKnown RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ZMYND8Q9ULU4 1186 aaPredicted RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ZNF780BQ9Y6R6 833 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 FARP2O94887 1054 aaPredicted RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 HOXC6P09630 235 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 PRG2P13727 222 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 PPM1AP35813 382 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 TBX2Q13207 712 aaPredicted RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 TCHHL1Q5QJ38 904 aaPredicted RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ADGRA1Q86SQ6 560 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ALG9Q9H6U8 611 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 A0A096LPK6 155 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 NR2F1P10589 423 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 GSTM5P46439 218 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 PEX6Q13608 980 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 OR14C36Q8NHC7 312 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 FRMD6Q96NE9 622 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 TMEM79Q9BSE2 394 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 PLK2Q9NYY3 685 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 SLC15A5A6NIM6 579 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 CLDN5O00501 218 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 RNASEH2AO75792 299 aaKnown RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 MASP1P48740 699 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 KCNMA1Q12791 1236 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ATAT1Q5SQI0 421 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 MTDHQ86UE4 582 aaKnown RBP11.15□□□□□ -0.62
TRIM41-209ENST00000515834 ZFPM1Q8IX07 1006 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 CDADC1Q9BWV3 514 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 CAMSAP1Q5T5Y3 1602 aa11.15□□□□□ -0.62
TRIM41-209ENST00000515834 CEP152O94986 1710 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 FAM86B1E9PN63 330 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 FTH1P02794 183 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.63
TRIM41-209ENST00000515834 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.63
TRIM41-209ENST00000515834 RPL9P32969 192 aaKnown RBP11.15□□□□□ -0.63
TRIM41-209ENST00000515834 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.63
TRIM41-209ENST00000515834 C16orf46Q6P387 395 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 SMG7Q92540 1137 aaKnown RBP11.15□□□□□ -0.63
TRIM41-209ENST00000515834 TMEM237Q96Q45 408 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 GRIP2Q9C0E4 1043 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 NEK6Q9HC98 313 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 INTS7Q9NVH2 962 aaKnown RBP11.15□□□□□ -0.63
TRIM41-209ENST00000515834 TOR4AQ9NXH8 423 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.63
TRIM41-209ENST00000515834 PHGDHO43175 533 aaKnown RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 MGRN1O60291 552 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 OR1D2P34982 312 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CCDC153Q494R4 210 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 ZNF571Q7Z3V5 609 aaPredicted RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 RIOX2Q8IUF8 465 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 DEFB107AQ8IZN7 70 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 HJURPQ8NCD3 748 aaPredicted RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 TCF7L2Q9NQB0 619 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 FBXO6Q9NRD1 293 aaPredicted RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CALCAP01258 141 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 RAD51AP1Q96B01 352 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 KCNN2Q9H2S1 579 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CFAP97Q9P2B7 532 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CROTQ9UKG9 612 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 ANGPT4Q9Y264 503 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 RNF17Q9BXT8 1623 aaKnown RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 GP5P40197 560 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 PIK3CGP48736 1102 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 C15orf59Q2T9L4 293 aaPredicted RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 TBC1D25Q3MII6 688 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 KLHL17Q6TDP4 642 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 ZNF605Q86T29 641 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 ARMC8Q8IUR7 673 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CFAP52Q8N1V2 620 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 ZFP28Q8NHY6 868 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 METTL21AQ8WXB1 218 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 UBE2E3Q969T4 207 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 RMND5BQ96G75 393 aaPredicted RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 MTMR9Q96QG7 549 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 RACGAP1Q9H0H5 632 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 TAGLN3Q9UI15 199 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms