RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 RNGTTO60942 597 aaKnown RBP13.95□□□□□ -0.18
TCOF1-215ENST00000515516 PCDH8O95206 1070 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 CTSLP07711 333 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 TNFAIP3P21580 790 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 RFC1P35251 1148 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-215ENST00000515516 NXPH1P58417 271 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 PTP4A2Q12974 167 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 POLD3Q15054 466 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-215ENST00000515516 CCDC157Q569K6 752 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 CARD16Q5EG05 197 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 EFHC2Q5JST6 749 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 PRAMEF14Q5SWL7 426 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 DCUN1D2Q6PH85 259 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 WDR59Q6PJI9 974 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 DPY19L3Q6ZPD9 716 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 ERN2Q76MJ5 926 aaKnown RBP13.95□□□□□ -0.18
TCOF1-215ENST00000515516 SLFN11Q7Z7L1 901 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 SLCO6A1Q86UG4 719 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 IQCHQ86VS3 1027 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 ZNF354CQ86Y25 554 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 RYBPQ8N488 228 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-215ENST00000515516 CHST14Q8NCH0 376 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 ZCCHC14Q8WYQ9 949 aaKnown RBP13.95□□□□□ -0.18
TCOF1-215ENST00000515516 CENPIQ92674 756 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-215ENST00000515516 BPIFA3Q9BQP9 254 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 HEPHQ9BQS7 1158 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 HDAC8Q9BY41 377 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 MAGEH1Q9H213 219 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 TMEM248Q9NWD8 314 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 ARHGAP20Q9P2F6 1191 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 DNAI1Q9UI46 699 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 ZMIZ1Q9ULJ6 1067 aa13.95□□□□□ -0.18
TCOF1-215ENST00000515516 ASCC3Q8N3C0 2202 aaKnown RBP13.95□□□□□ -0.18
TCOF1-215ENST00000515516 PI4KAP42356 2102 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 CXorf51AA0A1B0GTR3 108 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 A0A1W2PQU0 124 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 C10orf142B7Z368 130 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 WNT9AO14904 365 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 RAMP2O60895 175 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 LEFTY1O75610 366 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ZMPSTE24O75844 475 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 LRIG2O94898 1065 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ATXN1LP0C7T5 689 aaKnown RBP13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ATP1A3P13637 1013 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 AKT2P31751 481 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ACVRL1P37023 503 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ZNF143P52747 638 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-215ENST00000515516 HDAC4P56524 1084 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 RAB6CQ53S08 254 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 PIP5KL1Q5T9C9 394 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ACAD10Q6JQN1 1059 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 FBXL19Q6PCT2 694 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 MON1BQ7L1V2 547 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 GATAD2AQ86YP4 633 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 CCDC185Q8N715 623 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 BAHD1Q8TBE0 780 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-215ENST00000515516 NTAN1Q96AB6 310 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ARRDC3Q96B67 414 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 KLHDC7BQ96G42 594 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 MCEEQ96PE7 176 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 RAB6CQ9H0N0 254 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ERVMER34-1Q9H9K5 563 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 HECAQ9UBI9 543 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ZNF212Q9UDV6 495 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 MYO6Q9UM54 1294 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 FCF1Q9Y324 198 aaKnown RBP13.94□□□□□ -0.18
TCOF1-215ENST00000515516 ADAMTS9Q9P2N4 1935 aa13.94□□□□□ -0.18
TCOF1-215ENST00000515516 FAM72CH0Y354 149 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 SLC31A1O15431 190 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 LDOC1O95751 146 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-215ENST00000515516 EPHB2P29323 1055 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 L1CAMP32004 1257 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 NEK3P51956 506 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 AIF1P55008 147 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 ARF5P84085 180 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 ASIC2Q16515 512 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 FAM72AQ5TYM5 149 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 MANEALQ5VSG8 457 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 FAM72DQ6L9T8 149 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 CAVIN1Q6NZI2 390 aaKnown RBP13.93□□□□□ -0.18
TCOF1-215ENST00000515516 APTXQ7Z2E3 356 aaKnown RBP13.93□□□□□ -0.18
TCOF1-215ENST00000515516 NLRP14Q86W24 1093 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 HORMAD1Q86X24 394 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 FAM72BQ86X60 149 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 GALNT15Q8N3T1 639 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 ARHGEF2Q92974 986 aaKnown RBP13.93□□□□□ -0.18
TCOF1-215ENST00000515516 ISG20Q96AZ6 181 aaKnown RBP13.93□□□□□ -0.18
TCOF1-215ENST00000515516 FEM1CQ96JP0 617 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 EPAS1Q99814 870 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 CNPY3Q9BT09 278 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
TCOF1-215ENST00000515516 HSD3B7Q9H2F3 369 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 ZDHHC6Q9H6R6 413 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
TCOF1-215ENST00000515516 TMEM63CQ9P1W3 806 aa13.93□□□□□ -0.18
TCOF1-215ENST00000515516 ZSCAN5CA6NGD5 496 aaPredicted RBP13.92□□□□□ -0.18
TCOF1-215ENST00000515516 TEX33O43247 280 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 CCP110O43303 1012 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 BUB1O43683 1085 aa13.92□□□□□ -0.18
TCOF1-215ENST00000515516 CREB3O43889 395 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms