RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 PCP4L1A6NKN8 68 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 CYB561D2O14569 222 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 TFECO14948 347 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-214ENST00000515035 CYP7B1O75881 506 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 EPN2O95208 641 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 PBLDP30039 288 aaPredicted RBP13.46□□□□□ -0.25
TCOF1-214ENST00000515035 GJA8P48165 433 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 CLCN3P51790 818 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 RHOAP61586 193 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 ZNF484Q5JVG2 852 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 LPCAT4Q643R3 524 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 WDR59Q6PJI9 974 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 TXNRD3Q86VQ6 643 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 IQCKQ8N0W5 287 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 ATXN3LQ9H3M9 355 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 ETNK2Q9NVF9 386 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 ZMYM2Q9UBW7 1377 aa13.46□□□□□ -0.25
TCOF1-214ENST00000515035 DHRS12A0PJE2 317 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 A8MUI8 341 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 DCDC2CA8MYV0 355 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 F8VP50 259 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 SERPINA1P01009 418 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 GPR15P49685 360 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 CLK2P49760 499 aaKnown RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 TKTL1P51854 596 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 BLMHQ13867 455 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 STARD3Q14849 445 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 SEMA4BQ9NPR2 832 aaPredicted RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 AAASQ9NRG9 546 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 ING3Q9NXR8 418 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 IKZF3Q9UKT9 509 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 PRPF19Q9UMS4 504 aaKnown RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 ARHGAP23Q9P227 1491 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 ASTN2O75129 1339 aaPredicted RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 A0A087X1B8 175 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 TRMUO75648 421 aaKnown RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 OR6B1O95007 311 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 NPR3P17342 541 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 HOXA10P31260 410 aaPredicted RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 CHKAP35790 457 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 FKBP1AP62942 108 aaKnown RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 PARP8Q8N3A8 854 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 CAMKK1Q8N5S9 505 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 FBXO32Q969P5 355 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 STN1Q9H668 368 aaKnown RBP13.46□□□□□ -0.26
TCOF1-214ENST00000515035 AHSPQ9NZD4 102 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 COMMD9Q9P000 198 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 RAPGEFL1Q9UHV5 662 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 DOLKQ9UPQ8 538 aa13.46□□□□□ -0.26
TCOF1-214ENST00000515035 HACD1B0YJ81 288 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 CHADO15335 359 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 IFNGR2P38484 337 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 LPCAT1Q8NF37 534 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 MOSPD2Q8NHP6 518 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 SAE1Q9UBE0 346 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-214ENST00000515035 CCDC162PA2VCL2 907 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 CCNKO75909 580 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 HMGCRP04035 888 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 DNAJB2P25686 324 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 GRK4P32298 578 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 GSTM5P46439 218 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 RENBPP51606 427 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 NAA20P61599 178 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 EFEMP1Q12805 493 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 BNIP2Q12982 314 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 ATAD3BQ5T9A4 648 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 MCFD2Q8NI22 146 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 PRKAG3Q9UGI9 489 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 LEF1Q9UJU2 399 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-214ENST00000515035 ERGIC3Q9Y282 383 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 GSC2O15499 205 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 HOXB8P17481 243 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-214ENST00000515035 CYP4F2P78329 520 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 CYP4F3Q08477 520 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 C5orf22Q49AR2 442 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 SLCO6A1Q86UG4 719 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 HTRA1Q92743 480 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 TMEM138Q9NPI0 162 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 ARL8BQ9NVJ2 186 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 UMODL1Q5DID0 1318 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 CAPN8A6NHC0 703 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 PEX11AO75192 247 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 RHOCP08134 193 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 POLD2P49005 469 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 AMPD2Q01433 879 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 CBX3Q13185 183 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 C16orf62Q7Z3J2 963 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 C4orf19Q8IY42 314 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 LRRC19Q9H756 370 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 TAS2R14Q9NYV8 317 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 PSMD13Q9UNM6 376 aa13.45□□□□□ -0.26
TCOF1-214ENST00000515035 DDTLA6NHG4 134 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-214ENST00000515035 PRR5-ARHGAP8B1AHC4 643 aa13.44□□□□□ -0.26
TCOF1-214ENST00000515035 PLOD3O60568 738 aa13.44□□□□□ -0.26
TCOF1-214ENST00000515035 KPNA6O60684 536 aa13.44□□□□□ -0.26
TCOF1-214ENST00000515035 LYNP07948 512 aa13.44□□□□□ -0.26
TCOF1-214ENST00000515035 KDELR1P24390 212 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms