RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 SLITRK4Q8IW52 837 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 CCDC117Q8IWD4 279 aaPredicted RBP12.12□□□□□ -0.47
SMAD5-210ENST00000515005 PHACTR4Q8IZ21 702 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 LLPHQ9BRT6 129 aaKnown RBP12.12□□□□□ -0.47
SMAD5-210ENST00000515005 NT5C1AQ9BXI3 368 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 SLC17A9Q9BYT1 436 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 ULBP1Q9BZM6 244 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 SEMA6CQ9H3T2 930 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 PANK4Q9NVE7 773 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 GGT7Q9UJ14 662 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 NAALADL1Q9UQQ1 740 aa12.12□□□□□ -0.47
SMAD5-210ENST00000515005 DIDO1Q9BTC0 2240 aaKnown RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 ARHGAP10A1A4S6 786 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 TYW5A2RUC4 315 aaKnown RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 RNF103O00237 685 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 CLIC2O15247 247 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 TGFB1I1O43294 461 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 BNIP3LO60238 219 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 DIAPH2O60879 1101 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 C4BPAP04003 597 aaKnown RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 TRIM21P19474 475 aaKnown RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 INCA1Q0VD86 236 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 NAA30Q147X3 362 aaPredicted RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 TCEA2Q15560 299 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 DCAF6Q58WW2 860 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 ATP1A1-AS1Q5TC04 95 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 Q6ZVU0 165 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 TIPARPQ7Z3E1 657 aaKnown RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 SLC34A3Q8N130 599 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 PCDH19Q8TAB3 1148 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 KLF6Q99612 283 aaPredicted RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 SRRTQ9BXP5 876 aaKnown RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 UNKQ9C0B0 810 aaKnown RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 NUCKS1Q9H1E3 243 aaKnown RBP12.11□□□□□ -0.47
SMAD5-210ENST00000515005 AGPAT3Q9NRZ7 376 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 MAP4K5Q9Y4K4 846 aa12.11□□□□□ -0.47
SMAD5-210ENST00000515005 ANKHD1Q8IWZ3 2542 aaKnown RBP12.1□□□□□ -0.47
SMAD5-210ENST00000515005 YJEFN3A6XGL0 299 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 TCP11X1B4DZS4 312 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 E7ENQ6 273 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 KPNA3O00505 521 aaPredicted RBP12.1□□□□□ -0.47
SMAD5-210ENST00000515005 ALOX15BO15296 676 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
SMAD5-210ENST00000515005 RAD1O60671 282 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 FGF3P11487 239 aaPredicted RBP12.1□□□□□ -0.47
SMAD5-210ENST00000515005 LONP1P36776 959 aaKnown RBP12.1□□□□□ -0.47
SMAD5-210ENST00000515005 RECQLP46063 649 aaPredicted RBP12.1□□□□□ -0.47
SMAD5-210ENST00000515005 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
SMAD5-210ENST00000515005 SGSM1Q2NKQ1 1148 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 MS4A13Q5J8X5 152 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 EFHC2Q5JST6 749 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 MCTP1Q6DN14 999 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 SV2BQ7L1I2 683 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 UNC45BQ8IWX7 931 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 CCDC13Q8IYE1 715 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 XXYLT1Q8NBI6 393 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 EPSTI1Q96J88 318 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 SLC13A1Q9BZW2 595 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 GPN2Q9H9Y4 310 aaPredicted RBP12.1□□□□□ -0.47
SMAD5-210ENST00000515005 DOLKQ9UPQ8 538 aa12.1□□□□□ -0.47
SMAD5-210ENST00000515005 NIPBLQ6KC79 2804 aaeCLIP12.09□□□□□ -0.47
SMAD5-210ENST00000515005 MKRN2OSH3BPM6 223 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 TULP2O00295 520 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 FPGTO14772 594 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 ATP9BO43861 1147 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 PDGFAP04085 211 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 PDGFRAP16234 1089 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 NEK4P51957 841 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 PFN3P60673 137 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 RPS21P63220 83 aaKnown RBP12.09□□□□□ -0.47
SMAD5-210ENST00000515005 PTK2BQ14289 1009 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 DLG2Q15700 870 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 ARHGAP44Q17R89 818 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 FAXCQ5TGI0 409 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 C16orf46Q6P387 395 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 AZIN2Q96A70 460 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 TBATAQ96M53 351 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 UBXN6Q9BZV1 441 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 STK17AQ9UEE5 414 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 PCDHGA3Q9Y5H0 932 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 B3GALT1Q9Y5Z6 326 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 KCNMB2Q9Y691 235 aa12.09□□□□□ -0.47
SMAD5-210ENST00000515005 LRRIQ3A6PVS8 624 aaPredicted RBP12.08□□□□□ -0.48
SMAD5-210ENST00000515005 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
SMAD5-210ENST00000515005 ASS1P00966 412 aaKnown RBP12.08□□□□□ -0.48
SMAD5-210ENST00000515005 CD58P19256 250 aa12.08□□□□□ -0.48
SMAD5-210ENST00000515005 GJB2P29033 226 aa12.08□□□□□ -0.48
SMAD5-210ENST00000515005 ANAPC15P60006 121 aa12.08□□□□□ -0.48
SMAD5-210ENST00000515005 SULT2A1Q06520 285 aa12.08□□□□□ -0.48
SMAD5-210ENST00000515005 CCDC15Q0P6D6 951 aa12.08□□□□□ -0.48
SMAD5-210ENST00000515005 ERN2Q76MJ5 926 aaKnown RBP12.08□□□□□ -0.48
SMAD5-210ENST00000515005 UNC5BQ8IZJ1 945 aa12.08□□□□□ -0.48
SMAD5-210ENST00000515005 RCBTB1Q8NDN9 531 aa12.08□□□□□ -0.48
SMAD5-210ENST00000515005 SCG3Q8WXD2 468 aaKnown RBP12.08□□□□□ -0.48
SMAD5-210ENST00000515005 ERCC4Q92889 916 aaPredicted RBP12.08□□□□□ -0.48
SMAD5-210ENST00000515005 DDX50Q9BQ39 737 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms