RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 EDIL3O43854 480 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 PQBP1O60828 265 aaKnown RBP3.95□□□□□ -1.78
NEDD4-211ENST00000514893 TSHRP16473 764 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 STT3AP46977 705 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 MYBPC2Q14324 1141 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 GFOD2Q3B7J2 385 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 C14orf177Q52M58 125 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 ARL6IP4Q66PJ3 421 aaKnown RBP3.95□□□□□ -1.78
NEDD4-211ENST00000514893 SERPINA11Q86U17 422 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 PGBD5Q8N414 524 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 SECTM1Q8WVN6 248 aa3.95□□□□□ -1.78
NEDD4-211ENST00000514893 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.95□□□□□ -1.78
NEDD4-211ENST00000514893 FAM234BA2RU67 622 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 KPNA5O15131 536 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 CLCNKBP51801 687 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 ODR4Q5SWX8 454 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 FBXO38Q6PIJ6 1188 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 CLEC4CQ8WTT0 213 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 HDAC7Q8WUI4 952 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 NECTIN3Q9NQS3 549 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 SLC52A1Q9NWF4 448 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 SLC25A13Q9UJS0 675 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 THRAP3Q9Y2W1 955 aaKnown RBP3.94□□□□□ -1.78
NEDD4-211ENST00000514893 MST1RQ04912 1400 aa3.94□□□□□ -1.78
NEDD4-211ENST00000514893 IGHV4OR15-8A0A075B7B6 117 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 P2RY10O00398 339 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 FGF17O60258 216 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 CASP5P51878 434 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 PMP22Q01453 160 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 CTTNQ14247 550 aaKnown RBP3.93□□□□□ -1.78
NEDD4-211ENST00000514893 SLC1A5Q15758 541 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 TMEM268Q5VZI3 342 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 CYB5RLQ6IPT4 315 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 RINT1Q6NUQ1 792 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 NRSN1Q8IZ57 195 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 RBFAQ8N0V3 343 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 FAR1Q8WVX9 515 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 USP13Q92995 863 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-211ENST00000514893 TMEM18Q96B42 140 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 ANKRD9Q96BM1 317 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-211ENST00000514893 MTBPQ96DY7 904 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 NPAS1Q99742 590 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 Q9N2J8 555 aa3.93□□□□□ -1.78
NEDD4-211ENST00000514893 IGKV3D-15A0A087WSY6 115 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 DYTNA2CJ06 578 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 HNRNPDLO14979 420 aaKnown RBP3.92□□□□□ -1.78
NEDD4-211ENST00000514893 LARGE1O95461 756 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 ATP1A1P05023 1023 aaKnown RBP3.92□□□□□ -1.78
NEDD4-211ENST00000514893 HOXC13P31276 330 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 ADORA2A-AS1P86434 159 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 CALCRLQ16602 461 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 PLA2G4FQ68DD2 849 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 FOXL2NBQ6ZUU3 175 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 MARK2Q7KZI7 788 aaKnown RBP3.92□□□□□ -1.78
NEDD4-211ENST00000514893 RAVER1Q8IY67 606 aaKnown RBP3.92□□□□□ -1.78
NEDD4-211ENST00000514893 FRG2BQ96QU4 278 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 DDX23Q9BUQ8 820 aaKnown RBP3.92□□□□□ -1.78
NEDD4-211ENST00000514893 IFT27Q9BW83 186 aa3.92□□□□□ -1.78
NEDD4-211ENST00000514893 ANKRD62A6NC57 917 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 MBD3L5A6NJ08 208 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-211ENST00000514893 RASA4BC9J798 803 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 RPP40O75818 363 aaKnown RBP3.91□□□□□ -1.78
NEDD4-211ENST00000514893 CLDN7O95471 211 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 CH25HO95992 272 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 AFPP02771 609 aaKnown RBP3.91□□□□□ -1.78
NEDD4-211ENST00000514893 ZNF883P0CG24 379 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 FCGR2AP12318 317 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 GSTM2P28161 218 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 FMO4P31512 558 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 KRT2P35908 639 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 ALDH18A1P54886 795 aaKnown RBP3.91□□□□□ -1.78
NEDD4-211ENST00000514893 SYTL3Q4VX76 610 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 TMC8Q8IU68 726 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 MYO1HQ8N1T3 1032 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 TTC17Q96AE7 1141 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 OR1F2PQ96R84 312 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 STARD7Q9NQZ5 370 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 PAM16Q9Y3D7 125 aa3.91□□□□□ -1.78
NEDD4-211ENST00000514893 HNRNPCL2B2RXH8 293 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 AMBPP02760 352 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 CKMT1AP12532 417 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 KCNA5P22460 613 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 RPL3P39023 403 aaKnown RBP3.9□□□□□ -1.79
NEDD4-211ENST00000514893 PCP4P48539 62 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 ZNF132P52740 706 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 FAM3BP58499 235 aaPredicted RBP3.9□□□□□ -1.79
NEDD4-211ENST00000514893 RNASELQ05823 741 aaKnown RBP3.9□□□□□ -1.79
NEDD4-211ENST00000514893 BRI3BPQ8WY22 251 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 TRIM31Q9BZY9 425 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 TM7SF3Q9NS93 570 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 OBP2AQ9NY56 170 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 OSGIN2Q9Y236 505 aa3.9□□□□□ -1.79
NEDD4-211ENST00000514893 KIF28PB7ZC32 967 aa3.89□□□□□ -1.79
NEDD4-211ENST00000514893 NPIPB11E5RHQ5 1161 aa3.89□□□□□ -1.79
NEDD4-211ENST00000514893 PCDH17O14917 1159 aa3.89□□□□□ -1.79
NEDD4-211ENST00000514893 GAGE7O76087 117 aa3.89□□□□□ -1.79
NEDD4-211ENST00000514893 PMS2P2O95744 297 aa3.89□□□□□ -1.79
NEDD4-211ENST00000514893 GAGE12FP0CL80 117 aa3.89□□□□□ -1.79
NEDD4-211ENST00000514893 GAGE12GP0CL81 117 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms