RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 AIF1P55008 147 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 PPP2CBP62714 309 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 PPP2CAP67775 309 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 FAM193AP78312 1265 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 KLHL30Q0D2K2 578 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 NAXDQ8IW45 347 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 PYROXD2Q8N2H3 581 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 CHST14Q8NCH0 376 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 CAMK1GQ96NX5 476 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 MAGEH1Q9H213 219 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 TNKS2Q9H2K2 1166 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 WASF3Q9UPY6 502 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 PCDHGB2Q9Y5G2 931 aa23.53■■□□□ 1.36
CLDND1-230ENST00000514537 DDX3XO00571 662 aaKnown RBP eCLIP23.52■■□□□ 1.36
CLDND1-230ENST00000514537 PRNPP04156 253 aa23.52■■□□□ 1.36
CLDND1-230ENST00000514537 PBX1P40424 430 aa23.52■■□□□ 1.36
CLDND1-230ENST00000514537 CTSKP43235 329 aa23.52■■□□□ 1.36
CLDND1-230ENST00000514537 SIM1P81133 766 aaPredicted RBP23.52■■□□□ 1.36
CLDND1-230ENST00000514537 EFHC2Q5JST6 749 aa23.52■■□□□ 1.36
CLDND1-230ENST00000514537 DPY19L3Q6ZPD9 716 aa23.52■■□□□ 1.36
CLDND1-230ENST00000514537 TMC6Q7Z403 805 aa23.52■■□□□ 1.36
CLDND1-230ENST00000514537 ADAT2Q7Z6V5 191 aaKnown RBP23.52■■□□□ 1.36
CLDND1-230ENST00000514537 PCDH20Q8N6Y1 951 aaKnown RBP23.52■■□□□ 1.36
CLDND1-230ENST00000514537 ARHGAP20Q9P2F6 1191 aa23.52■■□□□ 1.36
CLDND1-230ENST00000514537 ACTL7AQ9Y615 435 aa23.52■■□□□ 1.36
CLDND1-230ENST00000514537 CABIN1Q9Y6J0 2220 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 RNF103O00237 685 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 WNT9AO14904 365 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 RAMP2O60895 175 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 FTLP02792 175 aaPredicted RBP23.51■■□□□ 1.35
CLDND1-230ENST00000514537 WNT1P04628 370 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 SKILP12757 684 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 RECQLP46063 649 aaPredicted RBP23.51■■□□□ 1.35
CLDND1-230ENST00000514537 UBASH3AP57075 661 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 TAS2R38P59533 333 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 ZNF423Q2M1K9 1284 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 ARSIQ5FYB1 569 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 PIP5KL1Q5T9C9 394 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 DNAAF5Q86Y56 855 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 ARRDC3Q96B67 414 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 IL36AQ9UHA7 158 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 FCF1Q9Y324 198 aaKnown RBP23.51■■□□□ 1.35
CLDND1-230ENST00000514537 WASF2Q9Y6W5 498 aa23.51■■□□□ 1.35
CLDND1-230ENST00000514537 CEP295Q9C0D2 2601 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 A0A1W2PR77 199 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 KPNA3O00505 521 aaPredicted RBP23.5■■□□□ 1.35
CLDND1-230ENST00000514537 KCNK3O14649 394 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 ATMINO43313 823 aaPredicted RBP23.5■■□□□ 1.35
CLDND1-230ENST00000514537 CBFA2T3O75081 653 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 DESP17661 470 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 EPHB2P29323 1055 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 C21orf59P57076 290 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 CCDC15Q0P6D6 951 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 FOXC1Q12948 553 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 POLD3Q15054 466 aaPredicted RBP23.5■■□□□ 1.35
CLDND1-230ENST00000514537 TRIP6Q15654 476 aaKnown RBP23.5■■□□□ 1.35
CLDND1-230ENST00000514537 CARD16Q5EG05 197 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 PRPF39Q86UA1 669 aaKnown RBP23.5■■□□□ 1.35
CLDND1-230ENST00000514537 TRIM69Q86WT6 500 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 PLPP6Q8IY26 295 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 RTL3Q8N8U3 475 aaKnown RBP23.5■■□□□ 1.35
CLDND1-230ENST00000514537 ISG20Q96AZ6 181 aaKnown RBP23.5■■□□□ 1.35
CLDND1-230ENST00000514537 SKA1Q96BD8 255 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 SERAC1Q96JX3 654 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 PREBQ9HCU5 417 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 AASDHPPTQ9NRN7 309 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 PCOLCE2Q9UKZ9 415 aa23.5■■□□□ 1.35
CLDND1-230ENST00000514537 A0A1W2PQJ5 194 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 TMEM191CA6NGB0 347 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 WASH4PA8MWX3 477 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 H0Y8X5 98 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 KDELR3O43731 214 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 LEFTY1O75610 366 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 PSMA2P25787 234 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 CD38P28907 300 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 NUDT1P36639 197 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 GEMIN4P57678 1058 aaKnown RBP23.49■■□□□ 1.35
CLDND1-230ENST00000514537 SUZ12Q15022 739 aaKnown RBP23.49■■□□□ 1.35
CLDND1-230ENST00000514537 ZSCAN23Q3MJ62 389 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 GRIN3AQ8TCU5 1115 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 EPAS1Q99814 870 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 HEPHQ9BQS7 1158 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 HDAC8Q9BY41 377 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 NOL6Q9H6R4 1146 aaKnown RBP23.49■■□□□ 1.35
CLDND1-230ENST00000514537 HPCAL4Q9UM19 191 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 PCDHB9Q9Y5E1 797 aa23.49■■□□□ 1.35
CLDND1-230ENST00000514537 NYNRINQ9P2P1 1898 aaKnown RBP23.48■■□□□ 1.35
CLDND1-230ENST00000514537 GOLGA6L19H0YKK7 550 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 CREB3O43889 395 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 DFNA5O60443 496 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 DNA2P51530 1060 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 NAPEPLDQ6IQ20 393 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 NEK5Q6P3R8 708 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 ERN2Q76MJ5 926 aaKnown RBP23.48■■□□□ 1.35
CLDND1-230ENST00000514537 ARFGAP1Q8N6T3 406 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 FNIP1Q8TF40 1166 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 SETD7Q8WTS6 366 aaKnown RBP23.48■■□□□ 1.35
CLDND1-230ENST00000514537 SYN2Q92777 582 aaPredicted RBP23.48■■□□□ 1.35
CLDND1-230ENST00000514537 DYRK4Q9NR20 520 aa23.48■■□□□ 1.35
CLDND1-230ENST00000514537 CNOT8Q9UFF9 292 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms