RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 FREM2Q5SZK8 3169 aa10.69□□□□□ -0.7
HMGXB3-205ENST00000514469 TMEM8BA6NDV4 472 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 RNF103O00237 685 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 KCNK3O14649 394 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 TEX33O43247 280 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 CCP110O43303 1012 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 LRIG2O94898 1065 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 CD160O95971 181 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 PRNPP04156 253 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 RHOQP17081 205 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 ETFBP38117 255 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 GRK6P43250 576 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 NXPH1P58417 271 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 IL9RQ01113 521 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 SLC20A2Q08357 652 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 NUMA1Q14980 2115 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 SHBQ15464 509 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 SLC45A4Q5BKX6 768 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 RETSATQ6NUM9 610 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 DNAJC24Q6P3W2 148 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 WDR59Q6PJI9 974 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 DPY19L3Q6ZPD9 716 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 IRF2BP2Q7Z5L9 587 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 CHCHD4Q8N4Q1 142 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 PCDH20Q8N6Y1 951 aaKnown RBP10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 KDF1Q8NAX2 398 aaPredicted RBP10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 CHST14Q8NCH0 376 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 GRIN3AQ8TCU5 1115 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 RHBDD1Q8TEB9 315 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 TBC1D31Q96DN5 1066 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 MCEEQ96PE7 176 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 ELF4Q99607 663 aaPredicted RBP10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 CDC6Q99741 560 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 SPON2Q9BUD6 331 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 HDAC8Q9BY41 377 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 TNKS2Q9H2K2 1166 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 GDF3Q9NR23 364 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 IL36AQ9UHA7 158 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 APOBEC2Q9Y235 224 aaKnown RBP10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 WASF2Q9Y6W5 498 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 TMEM131Q92545 1883 aa10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 COL5A1P20908 1838 aaPredicted RBP10.68□□□□□ -0.7
HMGXB3-205ENST00000514469 TP53BP1Q12888 1972 aaPredicted RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 TLR4O00206 839 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 KPNA3O00505 521 aaPredicted RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 YKT6O15498 198 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 LEFTY1O75610 366 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 KRT37O76014 449 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 PLEKP08567 350 aaPredicted RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 CCDC172P0C7W6 258 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 EPHA8P29322 1005 aaPredicted RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 MAT2AP31153 395 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 ACVRL1P37023 503 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 RECQLP46063 649 aaPredicted RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 ZNF143P52747 638 aaPredicted RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 AIF1P55008 147 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 INAVAQ3KP66 663 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 SETMARQ53H47 684 aaPredicted RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 RWDD4Q6NW29 188 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 CAVIN1Q6NZI2 390 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 NEK5Q6P3R8 708 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 ERN2Q76MJ5 926 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 SLFN11Q7Z7L1 901 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 PRPF39Q86UA1 669 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 SLCO6A1Q86UG4 719 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 IQCHQ86VS3 1027 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 MCOLN2Q8IZK6 566 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 PNPLA1Q8N8W4 532 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 MFSD2AQ8NA29 543 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 TMEM145Q8NBT3 493 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 ARHGEF2Q92974 986 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 PPP1R16AQ96I34 528 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 FUCA2Q9BTY2 467 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 MAGEB5Q9BZ81 275 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 MAGEH1Q9H213 219 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 ERVMER34-1Q9H9K5 563 aa10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 FCF1Q9Y324 198 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 MAP1BP46821 2468 aaKnown RBP10.67□□□□□ -0.7
HMGXB3-205ENST00000514469 DOCK4Q8N1I0 1966 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 A0A1B0GTH6 734 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 A0A1W2PQC6 194 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 ANKRD62A6NC57 917 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 SMTNL1A8MU46 457 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 PRAMEF26H0Y7S4 382 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 TNFSF14O43557 240 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 RAMP2O60895 175 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 RNGTTO60942 597 aaKnown RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 ATXN1LP0C7T5 689 aaKnown RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 ITGB7P26010 798 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 L1CAMP32004 1257 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 CCNHP51946 323 aaPredicted RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 GEMIN4P57678 1058 aaKnown RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 RPL7AP62424 266 aaKnown RBP10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 CCDC15Q0P6D6 951 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 OVGP1Q12889 678 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 CARD16Q5EG05 197 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
HMGXB3-205ENST00000514469 EFHC2Q5JST6 749 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms