RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 PKNOX2Q96KN3 472 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 RUNDC3BQ96NL0 473 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 KRT12Q99456 494 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 SPON2Q9BUD6 331 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 C2orf49Q9BVC5 232 aaPredicted RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 TMEM121BQ9BXQ6 578 aaPredicted RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 FAM129AQ9BZQ8 928 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 DHX35Q9H5Z1 703 aaKnown RBP8.51□□□□□ -1.05
CCL28-204ENST00000514421 LRRC19Q9H756 370 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 CATSPERBQ9H7T0 1116 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 CD248Q9HCU0 757 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 PRSS16Q9NQE7 514 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 TMEM248Q9NWD8 314 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 BCCIPQ9P287 314 aaKnown RBP eCLIP8.51□□□□□ -1.05
CCL28-204ENST00000514421 ZNF212Q9UDV6 495 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 VPS28Q9UK41 221 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 AP4E1Q9UPM8 1137 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 FAM186AA6NE01 2351 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 WDFY4Q6ZS81 3184 aa8.51□□□□□ -1.05
CCL28-204ENST00000514421 A0A0D9SEW6 157 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 GOLGA6L10A0A0M3HER8 536 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 CXorf51AA0A1B0GTR3 108 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 TTC34A8MYJ7 566 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 EEF2KO00418 725 aaKnown RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 FGF10O15520 208 aaPredicted RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 DAPK3O43293 454 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 SPOPO43791 374 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 PHF2O75151 1096 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 ZNF217O75362 1048 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 RPP40O75818 363 aaKnown RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 GABRG2P18507 467 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 PRKCHP24723 683 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 IL1R2P27930 398 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 ECHS1P30084 290 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 ETFBP38117 255 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 PLA2G5P39877 138 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 FNTAP49354 379 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 YBEYP58557 167 aaPredicted RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 TPI1P60174 286 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 COPS2P61201 443 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 FAM193AP78312 1265 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 SLC7A5Q01650 507 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 GNA12Q03113 381 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 SEMA3BQ13214 749 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 KLF1Q13351 362 aaPredicted RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 CA9Q16790 459 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 HNRNPA1L2Q32P51 320 aaKnown RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 ACCSLQ4AC99 568 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 KCNT1Q5JUK3 1230 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 RETSATQ6NUM9 610 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 CEP68Q76N32 757 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 POLNQ7Z5Q5 900 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 C11orf74Q86VG3 221 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 SLC13A5Q86YT5 568 aaPredicted RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 RHOT1Q8IXI2 618 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 RTL3Q8N8U3 475 aaKnown RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 PRELID2Q8N945 189 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 OR2T3Q8NH03 318 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 EXD1Q8NHP7 514 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 TEKT4Q8WW24 435 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 MAIP1Q8WWC4 291 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 SIPA1Q96FS4 1042 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 RPL10LQ96L21 214 aaKnown RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 MRGPRX1Q96LB2 322 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 PEBP4Q96S96 227 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 PHOX2BQ99453 314 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 SNRNP25Q9BV90 132 aaKnown RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 AP1M1Q9BXS5 423 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 ACE2Q9BYF1 805 aaPredicted RBP8.5□□□□□ -1.05
CCL28-204ENST00000514421 TPSD1Q9BZJ3 242 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 MAGEH1Q9H213 219 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 FBRSQ9HAH7 460 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 PRDM16Q9HAZ2 1276 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 MED4Q9NPJ6 270 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 ITM2CQ9NQX7 267 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 GPATCH2LQ9NWQ4 482 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 SLC25A13Q9UJS0 675 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 RAB23Q9ULC3 237 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 EFR3BQ9Y2G0 817 aa8.5□□□□□ -1.05
CCL28-204ENST00000514421 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCL28-204ENST00000514421 EDDM13A0A1B0GTR0 161 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 CBX4O00257 560 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 MAP3K13O43283 966 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 KDELR3O43731 214 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ATP9BO43861 1147 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 SNAP91O60641 907 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 RAMP2O60895 175 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 RHOBTB1O94844 696 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 RARAP10276 462 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ACADMP11310 421 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 NDUFV2P19404 249 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 P2RY2P41231 377 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 PTGIRP43119 386 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 SSR1P43307 286 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 CARSP49589 748 aaKnown RBP8.49□□□□□ -1.05
CCL28-204ENST00000514421 DNA2P51530 1060 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 NDST2P52849 883 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 GUCY2DQ02846 1103 aa8.49□□□□□ -1.05
CCL28-204ENST00000514421 ZBTB16Q05516 673 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms