RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 MT-ND1P03886 318 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 USP17L7P0C7H9 530 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TTKP33981 857 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 RGS4P49798 205 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SFT2D3Q587I9 215 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ZNF484Q5JVG2 852 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TIGD7Q6NT04 549 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TLDC1Q6P9B6 456 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 UNC5BQ8IZJ1 945 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 C8orf59Q8N0T1 100 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ZNF276Q8N554 614 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 AGBL3Q8NEM8 1001 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 TRPC4APQ8TEL6 797 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 ZNF516Q92618 1163 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 SLC7A6OSQ96CW6 309 aaPredicted RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 FAM120BQ96EK7 910 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 DHX33Q9H6R0 707 aaKnown RBP7.86□□□□□ -1.15
CLCN3-209ENST00000513761 HES2Q9Y543 173 aa7.86□□□□□ -1.15
CLCN3-209ENST00000513761 DCCP43146 1447 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 C9JVG2 144 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 VPS26AO75436 327 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 ZBTB11O95625 1053 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 IL1R2P27930 398 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 HOXA10P31260 410 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 AKT1P31749 480 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 MOGSQ13724 837 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 LSM12Q3MHD2 195 aaKnown RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 C11orf74Q86VG3 221 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 CAPSLQ8WWF8 208 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 GPR88Q9GZN0 384 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 RAD21L1Q9H4I0 556 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 DDX43Q9NXZ2 648 aaKnown RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 NUDT5Q9UKK9 219 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 PNMA8BQ9ULN7 279 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 BAZ2AQ9UIF9 1905 aaKnown RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 AMHP03971 560 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 TFEBP19484 476 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 NR4A1P22736 598 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 JAK1P23458 1154 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 RAB10P61026 200 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 C10orf120Q5SQS8 335 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 KLHDC10Q6PID8 442 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 EID3Q8N140 333 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 MPP5Q8N3R9 675 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SLC35B2Q8TB61 432 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 PRR11Q96HE9 360 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 ULBP1Q9BZM6 244 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SDCBP2Q9H190 292 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 MUC3BQ9H195 1237 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 STK39Q9UEW8 545 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 FAM50BQ9Y247 325 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 CAB39Q9Y376 341 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 COQ4Q9Y3A0 265 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SNED1Q8TER0 1413 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 TK2O00142 265 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 AGRPO00253 132 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 GUCA1CO95843 209 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 GSNP06396 782 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 CBX3Q13185 183 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 DGUOKQ16854 277 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 BROXQ5VW32 411 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 PIWIL4Q7Z3Z4 852 aaKnown RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SPPL2CQ8IUH8 684 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 REPS2Q8NFH8 660 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 PTCD3Q96EY7 689 aaKnown RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 TXLNGYQ9BZA5 131 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SETD4Q9NVD3 440 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 TEKT2Q9UIF3 430 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 NALCNQ8IZF0 1738 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 WNT10BO00744 389 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 CABYRO75952 493 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 ENDOD1O94919 500 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 LTA4HP09960 611 aaKnown RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 POU1F1P28069 291 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 MSLNQ13421 630 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SPIDRQ14159 915 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 TTC30AQ86WT1 665 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SFRP1Q8N474 314 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 UBR7Q8N806 425 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 PTGR2Q8N8N7 351 aaPredicted RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 OR7A2PQ8NGA2 310 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 PPP1R13LQ8WUF5 828 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 BHMTQ93088 406 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 VPS33AQ96AX1 596 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SYTL2Q9HCH5 934 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 ABCB10Q9NRK6 738 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 A0A087X1B8 175 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 CCDC189A1A4V9 331 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 GRIA1P42261 906 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 ABL2P42684 1182 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 PWP1Q13610 501 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 DLG2Q15700 870 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 SLC9B1Q4ZJI4 515 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 ANKS6Q68DC2 871 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 ZC3H3Q8IXZ2 948 aaKnown RBP7.85□□□□□ -1.15
CLCN3-209ENST00000513761 KIAA0319LQ8IZA0 1049 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 PGAM4Q8N0Y7 254 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 DNERQ8NFT8 737 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 BORCS5Q969J3 196 aa7.85□□□□□ -1.15
CLCN3-209ENST00000513761 CSPG4P5Q96PW8 444 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms