RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PON2Q15165 354 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 TRIP6Q15654 476 aaKnown RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 MAPK6Q16659 721 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 ITPRIPL2Q3MIP1 535 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 SLC27A1Q6PCB7 646 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 KANSL1Q7Z3B3 1105 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 FGD2Q7Z6J4 655 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 GLRX5Q86SX6 157 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 LRRTM3Q86VH5 581 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 CEP57Q86XR8 500 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 SYT12Q8IV01 421 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 ZNF843Q8N446 348 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 FANCBQ8NB91 859 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 TCP11Q8WWU5 503 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 PRPF31Q8WWY3 499 aaKnown RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 NLRP4Q96MN2 994 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 HNRNPABQ99729 332 aaKnown RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 BOCQ9BWV1 1114 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 NFKBIZQ9BYH8 718 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 TRIM6Q9C030 488 aaPredicted RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 CLMPQ9H6B4 373 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 GTSE1Q9NYZ3 720 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 MAPRE3Q9UPY8 281 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 APOBEC2Q9Y235 224 aaKnown RBP3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 CDY1Q9Y6F8 540 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 FREM2Q5SZK8 3169 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 CACNA1EQ15878 2313 aa3.99□□□□□ -1.77
PDLIM5-218ENST00000513341 E7EWF7 191 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 F8W810 466 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 H7C4K7 107 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 PRRG1O14668 218 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 ADAM12O43184 909 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 MOSPD3O75425 235 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 SERPINF2P08697 491 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 GAAP10253 952 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 ENGP17813 658 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 SOX5P35711 763 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 CCR2P41597 374 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 DGKEP52429 567 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 NAPAP54920 295 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 PTENP60484 403 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 ROR1Q01973 937 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 CFHR1Q03591 330 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 GFPT1Q06210 699 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 SRSF1Q07955 248 aaKnown RBP eCLIP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 SRSF4Q08170 494 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 LAMTOR4Q0VGL1 99 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 TFDP1Q14186 410 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 DUOXA1Q1HG43 343 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 ANKRD45Q5TZF3 282 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 PIK3R6Q5UE93 754 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 LMBRD2Q68DH5 695 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 CWC27Q6UX04 472 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 B3GNT9Q6UX72 402 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 TOGARAM2Q6ZUX3 1019 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 HEATR3Q7Z4Q2 680 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 RASSF3Q86WH2 238 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 ARID3BQ8IVW6 561 aaPredicted RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 GALNT15Q8N3T1 639 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 PSPC1Q8WXF1 523 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 PIGKQ92643 395 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 SLC5A5Q92911 643 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 RILPL2Q969X0 211 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 TCEAL4Q96EI5 215 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 UROC1Q96N76 676 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 TEKT3Q9BXF9 490 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 PRORYQ9H606 182 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 DHX33Q9H6R0 707 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 MINDY3Q9H8M7 445 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 ASAH2Q9NR71 780 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 DIAPH3Q9NSV4 1193 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 BARHL2Q9NY43 387 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 SAMD15Q9P1V8 674 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 USP36Q9P275 1121 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 AFF4Q9UHB7 1163 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 COQ6Q9Y2Z9 468 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 ASB3Q9Y575 518 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 TNPO3Q9Y5L0 923 aaKnown RBP3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 PTPRBP23467 1997 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 ATG2BQ96BY7 2078 aa3.98□□□□□ -1.77
PDLIM5-218ENST00000513341 COL6A6A6NMZ7 2263 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 ESYT2A0FGR8 921 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 TRABD2BA6NFA1 517 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CCDC69A6NI79 296 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 UNC119BA6NIH7 251 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 LRRC3CA6NJW4 275 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 SYN3O14994 580 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 DCLK1O15075 740 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 TSPAN1O60635 241 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 PSMD10O75832 226 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 B3GAT3O94766 335 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 ALDH1A2O94788 518 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 PLEKHA8P1O95397 391 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 PRB1P04280 392 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CYP17A1P05093 508 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CYP21A2P08686 494 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 FTH1P19P0C7X4 201 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 JMJD7P0C870 316 aa3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 MYCLP1P12525 358 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-218ENST00000513341 CD59P13987 128 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms