RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MARC1Q5VT66 337 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 LEKR1Q6ZMV7 388 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 SYDE1Q6ZW31 735 aaPredicted RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 GSTA5Q7RTV2 222 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 MAATS1Q7Z4T9 603 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 METTL3Q86U44 580 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 SFTPA1Q8IWL2 248 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 GJD3Q8N144 294 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 NOA1Q8NC60 698 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 ZNF419Q96HQ0 510 aaPredicted RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 SPATA13Q96N96 652 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 RBM22Q9NW64 420 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDPN-210ENST00000513143 SEPT10Q9P0V9 454 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 WNT16Q9UBV4 365 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 SLC25A13Q9UJS0 675 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 TRHDEQ9UKU6 1024 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 ERVW-1Q9UQF0 538 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 STARD13Q9Y3M8 1113 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 ATG2BQ96BY7 2078 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 FAM187AA6NFU0 413 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 K7EQS6 105 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 MAN2B1O00754 1011 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 TTI1O43156 1089 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 RAD51CO43502 376 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 OPHN1O60890 802 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 TMCC1O94876 653 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 IFNB1P01574 187 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 KRT14P02533 472 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 SRCP12931 536 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 ETS1P14921 441 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 DRD1P21728 446 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 MMP13P45452 471 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 STK19P49842 368 aaPredicted RBP12.75□□□□□ -0.37
PDPN-210ENST00000513143 NRLP54845 237 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 PRKCQQ04759 706 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 PON2Q15165 354 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 MLF2Q15773 248 aaPredicted RBP12.75□□□□□ -0.37
PDPN-210ENST00000513143 PTPRNQ16849 979 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 P3H1Q32P28 736 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 GLE1Q53GS7 698 aaKnown RBP12.75□□□□□ -0.37
PDPN-210ENST00000513143 ANKRD20A2Q5SQ80 823 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 ANKRD20A1Q5TYW2 823 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 ANKRD20A3Q5VUR7 823 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 TPRG1Q6ZUI0 275 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 JAMLQ86YT9 394 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 UBALD2Q8IYN6 164 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 ZNF567Q8N184 647 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 SH2D3CQ8N5H7 860 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 CNTD1Q8N815 330 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 CCDC89Q8N998 374 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 KDM1BQ8NB78 822 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 GLIS1Q8NBF1 620 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 CCDC110Q8TBZ0 833 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 USP33Q8TEY7 942 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 CYB5D2Q8WUJ1 264 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 UCMAQ8WVF2 138 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 SORCS1Q8WY21 1168 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 FAM3CQ92520 227 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 EZH1Q92800 747 aaPredicted RBP12.75□□□□□ -0.37
PDPN-210ENST00000513143 MYO19Q96H55 970 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 RPL10LQ96L21 214 aaKnown RBP12.75□□□□□ -0.37
PDPN-210ENST00000513143 MRGPRX3Q96LB0 322 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 TEKT5Q96M29 485 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 PSKH2Q96QS6 385 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 PCDH9Q9HC56 1237 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 CD320Q9NPF0 282 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 SEPT3Q9UH03 358 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 ATP8A1Q9Y2Q0 1164 aa12.75□□□□□ -0.37
PDPN-210ENST00000513143 K7ERQ8 282 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 ZBTB24O43167 697 aaPredicted RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 SMAD6O43541 496 aaKnown RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 ATP9BO43861 1147 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 ZSCAN5DPP0CG00 497 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 CD68P34810 354 aaPredicted RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 RPL22P35268 128 aaKnown RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 HSPA9P38646 679 aaKnown RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 NNMTP40261 264 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 GRSF1Q12849 480 aaKnown RBP eCLIP12.74□□□□□ -0.37
PDPN-210ENST00000513143 PTK6Q13882 451 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 ZNF235Q14590 738 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 E2F5Q15329 346 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 PPP1R7Q15435 360 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 FAM182AQ5T1J6 154 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 C8orf74Q6P047 294 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 C4orf22Q6V702 233 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 PID1Q7Z2X4 250 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 PRUNE1Q86TP1 453 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 BBS5Q8N3I7 341 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 PGBD5Q8N414 524 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 ATP11CQ8NB49 1132 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 ISG20Q96AZ6 181 aaKnown RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 AGAP3Q96P47 875 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 MGME1Q9BQP7 344 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 LRRC1Q9BTT6 524 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 CINPQ9BW66 212 aaPredicted RBP12.74□□□□□ -0.37
PDPN-210ENST00000513143 CEP41Q9BYV8 373 aa12.74□□□□□ -0.37
PDPN-210ENST00000513143 CEP44Q9C0F1 390 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms