RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 ANXA6P08133 673 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 SLC2A3P11169 496 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 UGT1A5P35504 534 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 ACADSBP45954 432 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 RECQLP46063 649 aaPredicted RBP12.86□□□□□ -0.35
DDX41-215ENST00000512431 MCCD1P59942 119 aaPredicted RBP12.86□□□□□ -0.35
DDX41-215ENST00000512431 LRMPQ12912 555 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 PTK2BQ14289 1009 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 DRAP1Q14919 205 aaPredicted RBP12.86□□□□□ -0.35
DDX41-215ENST00000512431 TBR1Q16650 682 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 SYPL2Q5VXT5 272 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 CXorf57Q6NSI4 855 aaKnown RBP12.86□□□□□ -0.35
DDX41-215ENST00000512431 GUF1Q8N442 669 aaKnown RBP12.86□□□□□ -0.35
DDX41-215ENST00000512431 TFAP2BQ92481 460 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 BOCQ9BWV1 1114 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 HDAC8Q9BY41 377 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 MUC3BQ9H195 1237 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 GPR27Q9NS67 375 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 ACSL6Q9UKU0 697 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 PCDHB4Q9Y5E5 795 aa12.86□□□□□ -0.35
DDX41-215ENST00000512431 NOBOXO60393 691 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 TRUB2O95900 331 aaKnown RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 CTSLP07711 333 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 SRCP12931 536 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 NOS2P35228 1153 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 NEK3P51956 506 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 ADKP55263 362 aaKnown RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 SERINC3Q13530 473 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 EDRF1Q3B7T1 1238 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 CBWD6Q4V339 395 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 PRRT3Q5FWE3 981 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 CBWD3Q5JTY5 395 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 CBWD5Q5RIA9 395 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 ZSCAN30Q86W11 494 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 SLC35F3Q8IY50 421 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 OR2A12Q8NGT7 310 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 ALG14Q96F25 216 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 TMEM74Q96NL1 305 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 GFM1Q96RP9 751 aaKnown RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 PRMT1Q99873 361 aaKnown RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 C2orf49Q9BVC5 232 aaPredicted RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 POPDC2Q9HBU9 364 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 GEMIN8Q9NWZ8 242 aaKnown RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 APOBEC3BQ9UH17 382 aaKnown RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 IL36AQ9UHA7 158 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 DOLKQ9UPQ8 538 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 HS3ST2Q9Y278 367 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 BOD1L1Q8NFC6 3051 aa12.85□□□□□ -0.35
DDX41-215ENST00000512431 TDRD6O60522 2096 aaKnown RBP12.85□□□□□ -0.35
DDX41-215ENST00000512431 M0QYT0 321 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 NVLO15381 856 aaKnown RBP12.84□□□□□ -0.35
DDX41-215ENST00000512431 CLDN11O75508 207 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 BRD2P25440 801 aaKnown RBP12.84□□□□□ -0.35
DDX41-215ENST00000512431 CCR1P32246 355 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 THOP1P52888 689 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 YWHAZP63104 245 aaKnown RBP12.84□□□□□ -0.35
DDX41-215ENST00000512431 MTA1Q13330 715 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 C4orf17Q53FE4 359 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 FAXCQ5TGI0 409 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 FBXL22Q6P050 247 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 GRIN3AQ8TCU5 1115 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 SCG3Q8WXD2 468 aaKnown RBP12.84□□□□□ -0.35
DDX41-215ENST00000512431 LENG8Q96PV6 779 aaPredicted RBP12.84□□□□□ -0.35
DDX41-215ENST00000512431 MED15Q96RN5 788 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 SLC13A1Q9BZW2 595 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 GULP1Q9UBP9 304 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 PISDQ9UG56 409 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 KLF15Q9UIH9 416 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 CFAP45Q9UL16 551 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 PCDHGA4Q9Y5G9 962 aa12.84□□□□□ -0.35
DDX41-215ENST00000512431 LMO7DNF2Z398 122 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 NTN3O00634 580 aaPredicted RBP12.83□□□□□ -0.36
DDX41-215ENST00000512431 CR2P20023 1033 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 CLCN6P51797 869 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 PDX1P52945 283 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 CDK17Q00537 523 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 CENPCQ03188 943 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 SRSF6Q13247 344 aaKnown RBP12.83□□□□□ -0.36
DDX41-215ENST00000512431 C1orf61Q13536 156 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 AUHQ13825 339 aaKnown RBP12.83□□□□□ -0.36
DDX41-215ENST00000512431 FOXD4L5Q5VV16 416 aaPredicted RBP12.83□□□□□ -0.36
DDX41-215ENST00000512431 UBR7Q8N806 425 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 FOXD4L4Q8WXT5 416 aaPredicted RBP12.83□□□□□ -0.36
DDX41-215ENST00000512431 TMEM159Q96B96 161 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 PPP1R13BQ96KQ4 1090 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 TBATAQ96M53 351 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 ADNPQ9H2P0 1102 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 VANGL2Q9ULK5 521 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 OR51B4Q9Y5P0 310 aa12.83□□□□□ -0.36
DDX41-215ENST00000512431 SYNJ2BP-COX16A0A087WUM0 186 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms