RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MOCS2O96007 188 aaPredicted RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 PAK4O96013 591 aaPredicted RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 APOEP02649 317 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 PRNPP04156 253 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 JMJD7P0C870 316 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 NR2F2P24468 414 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 RPL13P26373 211 aaKnown RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 CHRNA3P32297 505 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 PSMC2P35998 433 aaKnown RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 CASRP41180 1078 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 YWHAEP62258 255 aaKnown RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 DRAP1Q14919 205 aaPredicted RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 CLCA4Q14CN2 919 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 IGFBP7Q16270 282 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 RAP1GAP2Q684P5 730 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 SHC4Q6S5L8 630 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 LCLAT1Q6UWP7 414 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 Q6ZVU0 165 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 ERN2Q76MJ5 926 aaKnown RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 BEND5Q7L4P6 421 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 ZSCAN30Q86W11 494 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 CHSY1Q86X52 802 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 PTRH1Q86Y79 214 aaKnown RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 SLC35F3Q8IY50 421 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 FAM186BQ8IYM0 893 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 SH2D3CQ8N5H7 860 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 DQX1Q8TE96 717 aaKnown RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 TMEM159Q96B96 161 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 ALG14Q96F25 216 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 TBATAQ96M53 351 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 TMEM74Q96NL1 305 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 LRRC4CQ9HCJ2 640 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 EPB41L5Q9HCM4 733 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 SLC12A6Q9UHW9 1150 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 TUBD1Q9UJT1 453 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 ANAPC2Q9UJX6 822 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 PAXBP1Q9Y5B6 917 aa11.85□□□□□ -0.51
RNF4-216ENST00000511859 ZFC3H1O60293 1989 aaKnown RBP11.85□□□□□ -0.51
RNF4-216ENST00000511859 FPGTO14772 594 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 BNIP3LO60238 219 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 GABBR2O75899 941 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 FYNP06241 537 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 CTSLP07711 333 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 ANXA6P08133 673 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 CD82P27701 267 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 CCKBRP32239 447 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 RGS7P49802 495 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 PDE1CQ14123 709 aaPredicted RBP11.84□□□□□ -0.51
RNF4-216ENST00000511859 PTK2BQ14289 1009 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 NCAPHQ15003 741 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 RABGAP1LQ5R372 815 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 SEL1L3Q68CR1 1132 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 KIAA1161Q6NSJ0 714 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 BORAQ6PGQ7 559 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 DTX1Q86Y01 620 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 ATP6V0D2Q8N8Y2 350 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 LENG8Q96PV6 779 aaPredicted RBP11.84□□□□□ -0.51
RNF4-216ENST00000511859 GFM1Q96RP9 751 aaKnown RBP11.84□□□□□ -0.51
RNF4-216ENST00000511859 FUCA2Q9BTY2 467 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 TRIM62Q9BVG3 475 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 SYNDIG1Q9H7V2 258 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNF4-216ENST00000511859 XPO7Q9UIA9 1087 aaKnown RBP11.84□□□□□ -0.51
RNF4-216ENST00000511859 MTMR6Q9Y217 621 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 HS3ST2Q9Y278 367 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 LRRK1Q38SD2 2015 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 DOPEY1Q5JWR5 2465 aa11.84□□□□□ -0.51
RNF4-216ENST00000511859 A0A1W2PQ27 194 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 A0A1W2PQ64 194 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 A0A1W2PQC6 194 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 KCNU1A8MYU2 1149 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 PIK3R2O00459 728 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 SART1O43290 800 aaKnown RBP11.83□□□□□ -0.52
RNF4-216ENST00000511859 STX10O60499 249 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 GCATO75600 419 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 NOS2P35228 1153 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 NUMBP49757 651 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 MXI1P50539 228 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 ADKP55263 362 aaKnown RBP11.83□□□□□ -0.52
RNF4-216ENST00000511859 CYP4F2P78329 520 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 SGCGQ13326 291 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 ADAM9Q13443 819 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 CUL2Q13617 745 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 CNGA2Q16280 664 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 SKIDA1Q1XH10 827 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 FOXD4L6Q3SYB3 417 aaPredicted RBP11.83□□□□□ -0.52
RNF4-216ENST00000511859 ZC3H12AQ5D1E8 599 aaKnown RBP11.83□□□□□ -0.52
RNF4-216ENST00000511859 PRRT3Q5FWE3 981 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 CXorf57Q6NSI4 855 aaKnown RBP11.83□□□□□ -0.52
RNF4-216ENST00000511859 FOXD4L3Q6VB84 417 aaPredicted RBP11.83□□□□□ -0.52
RNF4-216ENST00000511859 B3GNT8Q7Z7M8 397 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 CEP57L1Q8IYX8 460 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 OR2A12Q8NGT7 310 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 CLEC4CQ8WTT0 213 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 HTR3CQ8WXA8 447 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 EEF2KMTQ96G04 330 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 PPP1R16AQ96I34 528 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 B3GNT4Q9C0J1 378 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 NAALADL1Q9UQQ1 740 aa11.83□□□□□ -0.52
RNF4-216ENST00000511859 BLACEA4D250 179 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms