RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 ACAP1Q15027 740 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 PLEKHG6Q3KR16 790 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 ZNF667Q5HYK9 610 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 KIAA1324Q6UXG2 1013 aaKnown RBP6.97□□□□□ -1.29
COPS4-209ENST00000511653 UNC13DQ70J99 1090 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 HTR3DQ70Z44 454 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 CACUL1Q86Y37 369 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 C12orf56Q8IXR9 622 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 GRAMD1CQ8IYS0 662 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 ZNF655Q8N720 491 aaPredicted RBP6.97□□□□□ -1.29
COPS4-209ENST00000511653 ENOX1Q8TC92 643 aaKnown RBP6.97□□□□□ -1.29
COPS4-209ENST00000511653 PARD3BQ8TEW8 1205 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 ZNF419Q96HQ0 510 aaPredicted RBP6.97□□□□□ -1.29
COPS4-209ENST00000511653 C7orf25Q9BPX7 421 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 TRIM39Q9HCM9 518 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 CSNK1G1Q9HCP0 422 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 AP5S1Q9NUS5 200 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 SLCO1B1Q9Y6L6 691 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 BOD1L1Q8NFC6 3051 aa6.97□□□□□ -1.29
COPS4-209ENST00000511653 KCNJ18B7U540 433 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 HHLA1C9JL84 531 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 H0Y626 953 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 PLD2O14939 933 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 ZNF217O75362 1048 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 ZNF205O95201 554 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 TRIM16O95361 564 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 LCP1P13796 627 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 POU4F1Q01851 419 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 BNC1Q01954 994 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 SCAPQ12770 1279 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 TRIP6Q15654 476 aaKnown RBP6.96□□□□□ -1.29
COPS4-209ENST00000511653 FUT11Q495W5 492 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 ZC3H12BQ5HYM0 836 aaKnown RBP6.96□□□□□ -1.29
COPS4-209ENST00000511653 C1orf220Q5T0J3 134 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 MBLAC2Q68D91 279 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 C19orf48Q6RUI8 117 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 CLEC20AQ6ZU45 233 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 NAXDQ8IW45 347 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 ZCCHC9Q8N567 271 aaKnown RBP6.96□□□□□ -1.29
COPS4-209ENST00000511653 KIAA0895Q8NCT3 520 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 NINJ1Q92982 152 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 TNIP3Q96KP6 325 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 CUEDC2Q9H467 287 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 UPF2Q9HAU5 1272 aaKnown RBP6.96□□□□□ -1.29
COPS4-209ENST00000511653 IL21RQ9HBE5 538 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 GPATCH2Q9NW75 528 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 PTPN13Q12923 2485 aa6.96□□□□□ -1.29
COPS4-209ENST00000511653 FLNCQ14315 2725 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 TMEM82A0PJX8 343 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 MSTNO14793 375 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 POLR2DO15514 142 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 STX6O43752 255 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 CBFA2T3O75081 653 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 PPP6R2O75170 966 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 DNAJC8O75937 253 aaPredicted RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 STC2O76061 302 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 ASS1P00966 412 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 KLKB1P03952 638 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 GSTM1P09488 218 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 FAM200BP0CF97 657 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 RARGP13631 454 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 ACO1P21399 889 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 ATP5C1P36542 298 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 IL12RB1P42701 662 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 AFMP43652 599 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 MFAP3P55082 362 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 SNRPFP62306 86 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 MAP4K2Q12851 820 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 STK4Q13043 487 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 GEN1Q17RS7 908 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 KNOP1Q1ED39 458 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 ZACNQ401N2 412 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 PREPLQ4J6C6 727 aaPredicted RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 TM4SF20Q53R12 229 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 USP53Q70EK8 1073 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 RABEPKQ7Z6M1 372 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 SCD5Q86SK9 330 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 SLCO6A1Q86UG4 719 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 MARCH9Q86YJ5 346 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 WFDC3Q8IUB2 231 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 IQUBQ8NA54 791 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 MDM1Q8TC05 714 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 ADAMTS14Q8WXS8 1223 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 KCTD13Q8WZ19 329 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 TOE1Q96GM8 510 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 XPO6Q96QU8 1125 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 LRRC27Q9C0I9 530 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 FBXO44Q9H4M3 255 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 APOBEC3GQ9HC16 384 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 TLR8Q9NR97 1041 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.96□□□□□ -1.3
COPS4-209ENST00000511653 COMMD8Q9NX08 183 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 USP36Q9P275 1121 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 WDR35Q9P2L0 1181 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 NDOR1Q9UHB4 597 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 LSM7Q9UK45 103 aaKnown RBP6.96□□□□□ -1.3
COPS4-209ENST00000511653 FBXO10Q9UK96 956 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 TCFL5Q9UL49 500 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 CLEC4EQ9ULY5 219 aa6.96□□□□□ -1.3
COPS4-209ENST00000511653 SCML2Q9UQR0 700 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms