RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 ATOH1Q92858 354 aaPredicted RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 PTPRN2Q92932 1015 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 ISG20Q96AZ6 181 aaKnown RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 ERLEC1Q96DZ1 483 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 SIPA1Q96FS4 1042 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 MKRN2Q9H000 416 aaKnown RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 RSPH9Q9H1X1 276 aaPredicted RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 PDFQ9HBH1 243 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 UBA2Q9UBT2 640 aaPredicted RBP13.11□□□□□ -0.31
COL6A6-203ENST00000511332 SCML1Q9UN30 329 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 MFHAS1Q9Y4C4 1052 aa13.11□□□□□ -0.31
COL6A6-203ENST00000511332 K7ERQ8 282 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 SMAD6O43541 496 aaKnown RBP13.1□□□□□ -0.31
COL6A6-203ENST00000511332 LILRB5O75023 590 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 RPP40O75818 363 aaKnown RBP13.1□□□□□ -0.31
COL6A6-203ENST00000511332 TMCC1O94876 653 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 FTCDO95954 541 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 ADH1BP00325 375 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 GSRP00390 522 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 DNTTP04053 509 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 C7P10643 843 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 VAV1P15498 845 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 MX2P20592 715 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 GALNT2Q10471 571 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 SFSWAPQ12872 951 aaKnown RBP13.1□□□□□ -0.31
COL6A6-203ENST00000511332 RFTN1Q14699 578 aaPredicted RBP13.1□□□□□ -0.31
COL6A6-203ENST00000511332 PPP2R5EQ16537 467 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 SLC9A4Q6AI14 798 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 MFSD7Q6UXD7 560 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 PQLC3Q8N755 202 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 TRIM58Q8NG06 486 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 NSMCE1Q8WV22 266 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 GAB3Q8WWW8 586 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 ZNF599Q96NL3 588 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 MTG2Q9H4K7 406 aa13.1□□□□□ -0.31
COL6A6-203ENST00000511332 IPO11Q9UI26 975 aaKnown RBP13.1□□□□□ -0.31
COL6A6-203ENST00000511332 FCF1Q9Y324 198 aaKnown RBP13.1□□□□□ -0.31
COL6A6-203ENST00000511332 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 C1QTNF3-AMACRE9PGA6 284 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 MCF2LO15068 1137 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 BNIP3LO60238 219 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 CD160O95971 181 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 IGSF6O95976 241 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 TGM2P21980 687 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 PTPN7P35236 360 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 GARSP41250 739 aaKnown RBP13.09□□□□□ -0.31
COL6A6-203ENST00000511332 NBL1P41271 181 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 RHOAP61586 193 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 RPS14P62263 151 aaKnown RBP13.09□□□□□ -0.31
COL6A6-203ENST00000511332 SNRPD1P62314 119 aaKnown RBP13.09□□□□□ -0.31
COL6A6-203ENST00000511332 TAZQ16635 292 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 TMCO4Q5TGY1 634 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 FAM46CQ5VWP2 391 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 TIGD7Q6NT04 549 aaPredicted RBP13.09□□□□□ -0.31
COL6A6-203ENST00000511332 LEKR1Q6ZMV7 388 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 PLPP6Q8IY26 295 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 STK40Q8N2I9 435 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 BBS5Q8N3I7 341 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 PLD5Q8N7P1 536 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 OR2AP1Q8NGE2 309 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 OR2A12Q8NGT7 310 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 GDAP1L1Q96MZ0 367 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 CINPQ9BW66 212 aaPredicted RBP13.09□□□□□ -0.31
COL6A6-203ENST00000511332 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 TNKS2Q9H2K2 1166 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 SEMA4AQ9H3S1 761 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 HAUS2Q9NVX0 235 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 USP36Q9P275 1121 aaKnown RBP13.09□□□□□ -0.31
COL6A6-203ENST00000511332 R4GN57 208 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
COL6A6-203ENST00000511332 J3KR12 359 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 PPP1R12AO14974 1030 aaPredicted RBP13.08□□□□□ -0.32
COL6A6-203ENST00000511332 MAFKO60675 156 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 IL1BP01584 269 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 PRNPP04156 253 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 C5AR1P21730 350 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 P2RY2P41231 377 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 PSMD8P48556 350 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 PEX5P50542 639 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 DNA2P51530 1060 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 DYNLT1P63172 113 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 GBE1Q04446 702 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 ZNF235Q14590 738 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 CST6Q15828 149 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 CARD16Q5EG05 197 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 ARHGAP36Q6ZRI8 547 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 CEP68Q76N32 757 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 BZW1Q7L1Q6 419 aaKnown RBP13.08□□□□□ -0.32
COL6A6-203ENST00000511332 KBTBD6Q86V97 674 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
COL6A6-203ENST00000511332 NETO2Q8NC67 525 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 ALG3Q92685 438 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 FATE1Q969F0 183 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 HDAC11Q96DB2 347 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 HES6Q96HZ4 224 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 PPP1R16AQ96I34 528 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 TM6SF2Q9BZW4 377 aa13.08□□□□□ -0.32
COL6A6-203ENST00000511332 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms