RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 PALB2Q86YC2 1186 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 NFKBIZQ9BYH8 718 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 FGF10O15520 208 aaPredicted RBP10.73□□□□□ -0.69
NEK1-206ENST00000510533 STX11O75558 287 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 ITGAVP06756 1048 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 LRRC55Q6ZSA7 311 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 KIAA0408Q6ZU52 694 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 GATAD2AQ86YP4 633 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 NKAPQ8N5F7 415 aaKnown RBP10.73□□□□□ -0.69
NEK1-206ENST00000510533 PRELID2Q8N945 189 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 LENG9Q96B70 501 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 PTCD3Q96EY7 689 aaKnown RBP10.73□□□□□ -0.69
NEK1-206ENST00000510533 TMEM134Q9H6X4 195 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 SPAG4Q9NPE6 437 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 KLQ9UEF7 1012 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 RGSL1A5PLK6 1076 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 TRIM38O00635 465 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 ENTPD5O75356 428 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 CCNA2P20248 432 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 TPP2P29144 1249 aaPredicted RBP10.73□□□□□ -0.69
NEK1-206ENST00000510533 CASP5P51878 434 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 ZSWIM7Q19AV6 140 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 DUPD1Q68J44 220 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 PTGR2Q8N8N7 351 aaPredicted RBP10.73□□□□□ -0.69
NEK1-206ENST00000510533 OR7A2PQ8NGA2 310 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 ACMSDQ8TDX5 336 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 BAP1Q92560 729 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 PGLYRP2Q96PD5 576 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 YME1L1Q96TA2 773 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 SENP6Q9GZR1 1112 aaPredicted RBP10.73□□□□□ -0.69
NEK1-206ENST00000510533 TMCO1Q9UM00 188 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 BTBD3Q9Y2F9 522 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 GSTK1Q9Y2Q3 226 aa10.73□□□□□ -0.69
NEK1-206ENST00000510533 LOC100506127A0A0U1RQW1 187 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 TRUB2O95900 331 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 RPN2P04844 631 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 CCDC166P0CW27 439 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 CHKAP35790 457 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 GRIA4P48058 902 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 NR1H2P55055 460 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 CRADDP78560 199 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 SPIRE1Q08AE8 756 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 RGS21Q2M5E4 152 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 FAM171A1Q5VUB5 890 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ABRAXAS1Q6UWZ7 409 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 MARK2Q7KZI7 788 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 KBTBD2Q8IY47 623 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 FAM71AQ8IYT1 594 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 AADATQ8N5Z0 425 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 MTFMTQ96DP5 389 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 ADARB2Q9NS39 739 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 SMPD4Q9NXE4 827 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 EHD3Q9NZN3 535 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 NWD1Q149M9 1564 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ZMPSTE24O75844 475 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 MYBL2P10244 700 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 CDC42P60953 191 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 CYP2A13Q16696 494 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 INTS11Q5TA45 600 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 UNC93AQ86WB7 457 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 TMEM86AQ8N2M4 240 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 RTL3Q8N8U3 475 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 GLIS3Q8NEA6 775 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 BPIFB6Q8NFQ5 453 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 RP9Q8TA86 221 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 SELENOMQ8WWX9 145 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 PORCNQ9H237 461 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ABCC13Q9NSE7 274 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 OR12D3Q9UGF7 316 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 LEF1Q9UJU2 399 aaPredicted RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 KLRC4O43908 158 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ATP6V1C1P21283 382 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ADSSP30520 456 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 CYP2C18P33260 490 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 IDH2P48735 452 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 CLCN5P51795 746 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 CASP7P55210 303 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ACOX1Q15067 660 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 PAGE2BQ5JRK9 111 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 STXBP5Q5T5C0 1151 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 MTG1Q9BT17 334 aaPredicted RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 ACP6Q9NPH0 428 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ASTN1O14525 1302 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 EPHB6O15197 1021 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 NDUFB5O43674 189 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 BDNFP23560 247 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 GSTM5P46439 218 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 RPL5P46777 297 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 MFSD10Q14728 455 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 IKBIPQ70UQ0 350 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ARRDC4Q8NCT1 418 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 SLC16A10Q8TF71 515 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 RNF157Q96PX1 679 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ADI1Q9BV57 179 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 KCNMB3Q9NPA1 279 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 MORF4L1Q9UBU8 362 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 UMODL1Q5DID0 1318 aa10.72□□□□□ -0.69
NEK1-206ENST00000510533 ZC3H13Q5T200 1668 aaKnown RBP10.72□□□□□ -0.69
NEK1-206ENST00000510533 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
NEK1-206ENST00000510533 BIRC5O15392 142 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms