RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 LRRC39Q96DD0 335 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 RRP36Q96EU6 259 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 HSPBAP1Q96EW2 488 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 MED30Q96HR3 178 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 RCC1LQ96I51 464 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TMEM68Q96MH6 324 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF560Q96MR9 790 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 RPRD1AQ96P16 312 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SH3GL2Q99962 352 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PANK2Q9BZ23 570 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 CRNKL1Q9BZJ0 848 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 DRC3Q9H069 523 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ISCUQ9H1K1 167 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 CARD9Q9H257 536 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 CERS4Q9HA82 394 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SPACA1Q9HBV2 294 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SARS2Q9NP81 518 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 FAM114A2Q9NRY5 505 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 NUDT15Q9NV35 164 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 POLR3BQ9NW08 1133 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ASNSD1Q9NWL6 643 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PAQR5Q9NXK6 330 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SENP1Q9P0U3 644 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TRPS1Q9UHF7 1281 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 RPS6KA6Q9UK32 745 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 CPSF3Q9UKF6 684 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TMCO1Q9UM00 188 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 STX8Q9UNK0 236 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 APOBEC2Q9Y235 224 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PIN4Q9Y237 131 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 POLHQ9Y253 713 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 DERAQ9Y315 318 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 NUP153P49790 1475 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PASKQ96RG2 1323 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 BCORL1Q5H9F3 1711 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SBNO1A3KN83 1393 aa4.65□□□□□ -1.66
NIPBL-206ENST00000509429 USP47Q96K76 1375 aa4.65□□□□□ -1.66
NIPBL-206ENST00000509429 IBTKQ9P2D0 1353 aaPredicted RBP4.65□□□□□ -1.66
NIPBL-206ENST00000509429 UNC13BO14795 1591 aa4.65□□□□□ -1.66
NIPBL-206ENST00000509429 TRPM1Q7Z4N2 1603 aa4.65□□□□□ -1.66
NIPBL-206ENST00000509429 MAGI1Q96QZ7 1491 aaPredicted RBP4.65□□□□□ -1.66
NIPBL-206ENST00000509429 ERICH2A1L162 156 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 XKRY2A2RUG3 117 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF879B4DU55 563 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 ERVV-2B6SEH9 535 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 NT5C1B-RDH14C9J2C7 533 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 H7BY64 318 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 K7ERQ8 282 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 TRIM38O00635 465 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CXCL11O14625 94 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CHUKO15111 745 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 SCAMP1O15126 338 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 PGRMC2O15173 223 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 RAD51BO15315 384 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 BIRC5O15392 142 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CTIFO43310 598 aaKnown RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CA12O43570 354 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 PTP4A3O75365 173 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CBR3O75828 277 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 GGPS1O95749 300 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 PFKMP08237 780 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 PRR35P0CG20 571 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 MYBP10242 640 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 GAAP10253 952 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 PRKACAP17612 351 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CCND1P24385 295 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CHMP24386 653 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 NFKBIAP25963 317 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 PTBP1P26599 531 aaKnown RBP eCLIP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 TLX1P31314 330 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 AKT1P31749 480 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 HNRNPH1P31943 449 aaKnown RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CIITAP33076 1130 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 GUCY1A2P33402 732 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 IL15P40933 162 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 ME1P48163 572 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 GIPRP48546 466 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 GDI2P50395 445 aaKnown RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 ADARP55265 1226 aaKnown RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 EEF1A1P68104 462 aaKnown RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 YWHAHQ04917 246 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 EEF1A2Q05639 463 aaKnown RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 SEMA5AQ13591 1074 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 ACVR2BQ13705 512 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 DMC1Q14565 340 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 NONOQ15233 471 aaKnown RBP eCLIP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 PCBP1Q15365 356 aaKnown RBP eCLIP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 PCBP2Q15366 365 aaKnown RBP eCLIP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 MYLK3Q32MK0 819 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 HSP90AA4PQ58FG1 418 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 RABL3Q5HYI8 236 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 EFHC1Q5JVL4 640 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 LIN9Q5TKA1 542 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF658Q5TYW1 1059 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 GKAP1Q5VSY0 366 aaPredicted RBP4.65□□□□□ -1.67
NIPBL-206ENST00000509429 EEF1A1P5Q5VTE0 462 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CEP85Q6P2H3 762 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 UNC5AQ6ZN44 842 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 CLEC17AQ6ZS10 378 aa4.65□□□□□ -1.67
NIPBL-206ENST00000509429 MARK2Q7KZI7 788 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms