RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.17□□□□□ -0.62
RNF4-212ENST00000509258 PRPF39Q86UA1 669 aaKnown RBP11.17□□□□□ -0.62
RNF4-212ENST00000509258 DNAAF5Q86Y56 855 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 AOPEPQ8N6M6 819 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 CCDC185Q8N715 623 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 OR14C36Q8NHC7 312 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 SAP25Q8TEE9 199 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 RXFP2Q8WXD0 754 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 OR8D1Q8WZ84 308 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 ARRDC3Q96B67 414 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 SERAC1Q96JX3 654 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 CNDP2Q96KP4 475 aaKnown RBP11.17□□□□□ -0.62
RNF4-212ENST00000509258 CCDC114Q96M63 670 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 SPAG5Q96R06 1193 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 ARHGAP20Q9P2F6 1191 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 PPM1HQ9ULR3 514 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 STAP1Q9ULZ2 295 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 CA5BQ9Y2D0 317 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 FARP1Q9Y4F1 1045 aaPredicted RBP11.17□□□□□ -0.62
RNF4-212ENST00000509258 SHROOM3Q8TF72 1996 aa11.17□□□□□ -0.62
RNF4-212ENST00000509258 GCN1Q92616 2671 aaKnown RBP11.17□□□□□ -0.62
RNF4-212ENST00000509258 ASXL3Q9C0F0 2248 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 C2CD4BA6NLJ0 364 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 CBX4O00257 560 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 BNIP3LO60238 219 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 SRGAP2O75044 1071 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 RHOCP08134 193 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 JUPP14923 745 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 RFC1P35251 1148 aaPredicted RBP11.16□□□□□ -0.62
RNF4-212ENST00000509258 ACVRL1P37023 503 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 ACADVLP49748 655 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 HDAC4P56524 1084 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 NXPH1P58417 271 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 ARF5P84085 180 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 MYL5Q02045 173 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 TYRO3Q06418 890 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 CLEC16AQ2KHT3 1053 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 ACCSLQ4AC99 568 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 HS1BP3Q53T59 392 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 E4F1Q66K89 784 aaPredicted RBP11.16□□□□□ -0.62
RNF4-212ENST00000509258 NAPEPLDQ6IQ20 393 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 PIP4K2CQ8TBX8 421 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 DCBLD2Q96PD2 775 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 GBP4Q96PP9 640 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 ERGIC2Q96RQ1 377 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 SYT11Q9BT88 431 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 MUC3BQ9H195 1237 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 TNKS2Q9H2K2 1166 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 ANO10Q9NW15 660 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 RRN3Q9NYV6 651 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 TAS2R14Q9NYV8 317 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 HS3ST2Q9Y278 367 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 PAXBP1Q9Y5B6 917 aa11.16□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3DA0A087WVF3 549 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3IA0A087WXS9 549 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3EA0A087X179 549 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3KA0A087X1G2 549 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3FA6NER0 549 aaPredicted RBP11.15□□□□□ -0.62
RNF4-212ENST00000509258 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3LB9A6J9 549 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TLR4O00206 839 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 LATO43561 262 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3HP0C7X1 549 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 MAT2AP31153 395 aaKnown RBP11.15□□□□□ -0.62
RNF4-212ENST00000509258 OGDHQ02218 1023 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 UBXN1Q04323 297 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 OVGP1Q12889 678 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 DNAJC3Q13217 504 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 ILKQ13418 452 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 ANO6Q4KMQ2 910 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 FKBP15Q5T1M5 1219 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 CCDC183Q5T5S1 534 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 ACBD5Q5T8D3 534 aaPredicted RBP11.15□□□□□ -0.62
RNF4-212ENST00000509258 PIP5KL1Q5T9C9 394 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 SFMBT2Q5VUG0 894 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3GQ6DHY5 549 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3CQ6IPX1 549 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 SASS6Q6UVJ0 657 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 MON1BQ7L1V2 547 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 ARCQ7LC44 396 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 IQCHQ86VS3 1027 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 NLRP14Q86W24 1093 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 ZNF677Q86XU0 584 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 SPATS2Q86XZ4 545 aaKnown RBP11.15□□□□□ -0.62
RNF4-212ENST00000509258 DRC7Q8IY82 874 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 TBC1D3Q8IZP1 549 aaPredicted RBP11.15□□□□□ -0.62
RNF4-212ENST00000509258 PYROXD2Q8N2H3 581 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 EID2Q8N6I1 236 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 MFSD2AQ8NA29 543 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 NETO2Q8NC67 525 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 OR2A12Q8NGT7 310 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 BAP1Q92560 729 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 KLK6Q92876 244 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 C1orf74Q96LT6 269 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 BBC3Q96PG8 261 aaPredicted RBP11.15□□□□□ -0.62
RNF4-212ENST00000509258 HAPLN3Q96S86 360 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 ERVMER34-1Q9H9K5 563 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 DMTF1Q9Y222 760 aa11.15□□□□□ -0.62
RNF4-212ENST00000509258 COL27A1Q8IZC6 1860 aaPredicted RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 5.6 ms