RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 CSPG4P5Q96PW8 444 aa10.81□□□□□ -0.68
POLR2J3-213ENST00000508848 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-213ENST00000508848 SPON2Q9BUD6 331 aa10.81□□□□□ -0.68
POLR2J3-213ENST00000508848 CPEB1Q9BZB8 566 aaKnown RBP10.81□□□□□ -0.68
POLR2J3-213ENST00000508848 TPSD1Q9BZJ3 242 aa10.81□□□□□ -0.68
POLR2J3-213ENST00000508848 PABPC3Q9H361 631 aaKnown RBP10.81□□□□□ -0.68
POLR2J3-213ENST00000508848 VPS45Q9NRW7 570 aa10.81□□□□□ -0.68
POLR2J3-213ENST00000508848 EVLQ9UI08 416 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-213ENST00000508848 CABIN1Q9Y6J0 2220 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 PRR5-ARHGAP8B1AHC4 643 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 C1QTNF3-AMACRE9PGA6 284 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 SMAD6O43541 496 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 SNAP91O60641 907 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 PRAMEF11O60813 436 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 NDUFS2O75306 463 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 ACVRL1P37023 503 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 RECQLP46063 649 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 CCR5P51681 352 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 SUOXP51687 545 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 SNRPD1P62314 119 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 ARHGAP8P85298 464 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 IL10RBQ08334 325 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 SRSF5Q13243 272 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 PAFAH1B3Q15102 231 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 TAZQ16635 292 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 ACCSLQ4AC99 568 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 CARD16Q5EG05 197 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 PPP6R3Q5H9R7 873 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 RALGPS1Q5JS13 557 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 KCNT1Q5JUK3 1230 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 C11orf63Q6NUN7 778 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 KIAA1324Q6UXG2 1013 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 PRR23BQ6ZRT6 265 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 ZNF662Q6ZS27 426 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 ALYREFQ86V81 257 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 ARHGAP12Q8IWW6 846 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 STK40Q8N2I9 435 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 CCDC112Q8NEF3 446 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 TOE1Q96GM8 510 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 TSGA13Q96PP4 275 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 OSBPL1AQ9BXW6 950 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 HDAC8Q9BY41 377 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 BTBD1Q9H0C5 482 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 PDFQ9HBH1 243 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 FBXL12Q9NXK8 326 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 DDX56Q9NY93 547 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 NCDNQ9UBB6 729 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 AMACRQ9UHK6 382 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 PILRBQ9UKJ0 227 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 TRPM6Q9BX84 2022 aa10.8□□□□□ -0.68
POLR2J3-213ENST00000508848 PSTPIP1O43586 416 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 KDELR1P24390 212 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 CHRNA3P32297 505 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 HSPA9P38646 679 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 RENBPP51606 427 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 VAV2P52735 878 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 LIMK1P53667 647 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 CDH6P55285 790 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 RPL6Q02878 288 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 RAD51Q06609 339 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 DPYSL3Q14195 570 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 MESDQ14696 234 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 IFI16Q16666 785 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 WDR45BQ5MNZ6 344 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 TXNRD3NBQ6F5E7 133 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 C22orf39Q6P5X5 142 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 SLC23A3Q6PIS1 610 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 TMCO3Q6UWJ1 677 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 MMAAQ8IVH4 418 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 RHOT1Q8IXI2 618 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 RNF10Q8N5U6 811 aaKnown RBP10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 KCTD6Q8NC69 237 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 OR2AP1Q8NGE2 309 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 OR2T34Q8NGX1 318 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 C1orf216Q8TAB5 229 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 RLN3Q8WXF3 142 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 RAB7BQ96AH8 199 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 HMCESQ96FZ2 354 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 BTBD6Q96KE9 485 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 HEPHQ9BQS7 1158 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 SLC39A8Q9C0K1 460 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 DKK3Q9UBP4 350 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 SUSD2Q9UGT4 822 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 EFR3BQ9Y2G0 817 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 ALG6Q9Y672 507 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 ANKRD36A6QL64 1941 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 PCNX2A6NKB5 2137 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 SHROOM3Q8TF72 1996 aa10.79□□□□□ -0.68
POLR2J3-213ENST00000508848 SOWAHDA6NJG2 315 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 LRRC72A6NJI9 287 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 K7ERQ8 282 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 LATO43561 262 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 BUB1O43683 1085 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 AP1G1O43747 822 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 IL1BP01584 269 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 TCF4P15884 667 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 ZFXP17010 805 aaPredicted RBP10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 BCKDHBP21953 392 aa10.78□□□□□ -0.68
POLR2J3-213ENST00000508848 CES1P23141 567 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms