RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 C9orf152Q5JTZ5 239 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 ATXN7L2Q5T6C5 722 aaPredicted RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 TMEM154Q6P9G4 183 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 ZYG11AQ6WRX3 759 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 LINC00696Q6ZRV3 163 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 RD3Q7Z3Z2 195 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM160B2Q86V87 743 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 TMEM200AQ86VY9 491 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 XYLT1Q86Y38 959 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 DNAAF5Q86Y56 855 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CCDC28AQ8IWP9 274 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 ADGRF2Q8IZF7 708 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 LILRA3Q8N6C8 439 aaPredicted RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 RTL3Q8N8U3 475 aaKnown RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SYT2Q8N9I0 419 aaPredicted RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 POC5Q8NA72 575 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 PIK3C3Q8NEB9 887 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 OR52N2Q8NGI0 321 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 IFI44Q8TCB0 444 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 NOC3LQ8WTT2 800 aaKnown RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC5A11Q8WWX8 675 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 HOXB13Q92826 284 aaPredicted RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 HIST1H2AHQ96KK5 128 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM81BQ96LP2 452 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 DCLRE1CQ96SD1 692 aaKnown RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 PKP4Q99569 1192 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 HIST1H2AJQ99878 128 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 TUBB6Q9BUF5 446 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 HTATIP2Q9BUP3 242 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CPEB1Q9BZB8 566 aaKnown RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 IL1RAPL2Q9NP60 686 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SEMA4BQ9NPR2 832 aaPredicted RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 AKIP1Q9NQ31 210 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SERINC1Q9NRX5 453 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 HOMER3Q9NSC5 361 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC35D1Q9NTN3 355 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 TCP11L1Q9NUJ3 509 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CHCHD3Q9NX63 227 aaKnown RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC25A10Q9UBX3 287 aaPredicted RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SLCO3A1Q9UIG8 710 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 MID2Q9UJV3 735 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 APPL1Q9UKG1 709 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 USP18Q9UMW8 372 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 NOSIPQ9Y314 301 aaKnown RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 COL11A2P13942 1736 aaPredicted RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 FRMD3A2A2Y4 597 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GLOD5A6NK44 160 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TMEM200CA6NKL6 621 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM171A2A8MVW0 826 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 MYO1GB0I1T2 1018 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 LEFTY2O00292 366 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 RNASET2O00584 256 aaKnown RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 NRP1O14786 923 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 DIAPH2O60879 1101 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TFRCP02786 760 aaKnown RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 ANXA6P08133 673 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GHRP10912 638 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 AVPR2P30518 371 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 IDUAP35475 653 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 BSGP35613 385 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 NPY4RP50391 375 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 ATXN3P54252 364 aaPredicted RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 ADARP55265 1226 aaKnown RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GMFBP60983 142 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TRA2BP62995 288 aaKnown RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 PPATQ06203 517 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 NSUN2Q08J23 767 aaKnown RBP eCLIP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 KIF5AQ12840 1032 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 LMAN2Q12907 356 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 MRPL49Q13405 166 aaKnown RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TUBB2AQ13885 445 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 CAPSQ13938 189 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 MXD4Q14582 209 aaPredicted RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GRM4Q14833 912 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 PDK1Q15118 436 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 INAQ16352 499 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 NTRK2Q16620 822 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC5A9Q2M3M2 681 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GALNTL6Q49A17 601 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNF484Q5JVG2 852 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 COLEC12Q5KU26 742 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 CYP4A22Q5TCH4 519 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 C12orf60Q5U649 245 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 EMC10Q5UCC4 262 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 CES4AQ5XG92 561 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 OTUD7BQ6GQQ9 843 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 PM20D1Q6GTS8 502 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TTI2Q6NXR4 508 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 FBXO42Q6P3S6 717 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 KLHL35Q6PF15 583 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 USP17L6PQ6QN14 398 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GBP6Q6ZN66 633 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 ADCK1Q86TW2 530 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 ARHGEF19Q8IW93 802 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 WDR63Q8IWG1 891 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 MAML2Q8IZL2 1156 aaPredicted RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 SYCP3Q8IZU3 236 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms