RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CHSY1Q86X52 802 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 RAB11FIP4Q86YS3 637 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 CROCCP3Q8IVE0 287 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 IQCF2Q8IXL9 164 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 FAM186BQ8IYM0 893 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 PNLDC1Q8NA58 520 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 PPFIBP2Q8ND30 876 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 BRIX1Q8TDN6 353 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 OTUD7AQ8TE49 926 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 ATG4AQ8WYN0 398 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 NCSTNQ92542 709 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 MAP4K1Q92918 833 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 CHMP6Q96FZ7 201 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 NR1H4Q96RI1 486 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 SEC62Q99442 399 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 SLX1AQ9BQ83 275 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 ASPSCR1Q9BZE9 553 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 NDST4Q9H3R1 872 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 GLOD4Q9HC38 313 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 TXLNGQ9NUQ3 528 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 RMND1Q9NWS8 449 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 QPCTLQ9NXS2 382 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 AATFQ9NY61 560 aaKnown RBP eCLIP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 SH2B3Q9UQQ2 575 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 TMEM98Q9Y2Y6 226 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 TNRC6CQ9HCJ0 1690 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 MROH7Q68CQ1 1323 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 SMIM31A0A1B0GVY4 71 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 TMEM221A6NGB7 291 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 KCNU1A8MYU2 1149 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 H3BUI4 141 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 LSM1O15116 133 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CETN3O15182 167 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 SKAP2O75563 359 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF189O75820 626 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 UNC5CO95185 931 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 POU2F2P09086 479 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ATXN1LP0C7T5 689 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 NQO1P15559 274 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF18P17022 549 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 TRPC1P48995 793 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PXNP49023 591 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PDE6CP51160 858 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PLCD1P51178 756 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 TNNC1P63316 161 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CCDC15Q0P6D6 951 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 AIMP1Q12904 312 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ITPK1Q13572 414 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ITGA9Q13797 1035 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 NONOQ15233 471 aaKnown RBP eCLIP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PARP6Q2NL67 630 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CCDC153Q494R4 210 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CFAP221Q4G0U5 840 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CCDC157Q569K6 752 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ODF2Q5BJF6 829 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CFAP157Q5JU67 520 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 WASHC2DQ5SRD0 308 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 SFMBT2Q5VUG0 894 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 RGS7BPQ6MZT1 257 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF280DQ6N043 979 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CATSPERGQ6ZRH7 1159 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF554Q86TJ5 538 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 DZIP1Q86YF9 867 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 LRRC49Q8IUZ0 686 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 IQCKQ8N0W5 287 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CLASRPQ8N2M8 674 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 FBXL16Q8N461 479 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 NOA1Q8NC60 698 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 LINC00301Q8NCQ3 95 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CYP2W1Q8TAV3 490 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ATP8B4Q8TF62 1192 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 GLG1Q92896 1179 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 GRAMD1AQ96CP6 724 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 R3HDM4Q96D70 268 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 DHTKD1Q96HY7 919 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 HIC2Q96JB3 615 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 FAM167AQ96KS9 214 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CAPNS2Q96L46 248 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF570Q96NI8 536 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 NDNQ99608 321 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CGREF1Q99674 301 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PTDSS2Q9BVG9 487 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 FSD1LQ9BXM9 530 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 SPRTNQ9H040 489 aaPredicted RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 BRD8Q9H0E9 1235 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 CCDC134Q9H6E4 229 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 MRPL44Q9H9J2 332 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PARVBQ9HBI1 364 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PDGFCQ9NRA1 345 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 HELLSQ9NRZ9 838 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PCDHA7Q9UN72 937 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 ADAMTS5Q9UNA0 930 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 HYOU1Q9Y4L1 999 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 BZW2Q9Y6E2 419 aaKnown RBP4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 LY75O60449 1722 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PKD1L3Q7Z443 1732 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 PIK3C2AO00443 1686 aa4.79□□□□□ -1.64
PDLIM5-211ENST00000508531 SBF1O95248 1867 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms