RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 RPS6KA3P51812 740 aa4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 FOXO1Q12778 655 aa4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 CHAF1AQ13111 956 aaPredicted RBP4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 SMAD1Q15797 465 aaKnown RBP4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 NADSYN1Q6IA69 706 aa4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 FSIP1Q8NA03 581 aa4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 HDAC7Q8WUI4 952 aa4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 GOLGA1Q92805 767 aa4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 MPHOSPH6Q99547 160 aaKnown RBP4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 CD93Q9NPY3 652 aa4.95□□□□□ -1.62
UBE2D3-225ENST00000508476 CCDC194A0A1B0GVG4 234 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 IFITM10A6NMD0 228 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 GNLYP22749 145 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 CST5P28325 142 aaPredicted RBP4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 CLCNKBP51801 687 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 RBM5P52756 815 aaKnown RBP eCLIP4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 CDH12P55289 794 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 CUL4BQ13620 913 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 BRD3Q15059 726 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 AP5B1Q2VPB7 878 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 ZNF484Q5JVG2 852 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 TBC1D9BQ66K14 1250 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 ATG9BQ674R7 924 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 SERPINA11Q86U17 422 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 MIGA1Q8NAN2 632 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 LINS1Q8NG48 757 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 KTI12Q96EK9 354 aaPredicted RBP4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 LHPPQ9H008 270 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 CXorf56Q9H5V9 222 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 G6PC2Q9NQR9 355 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 HDAC6Q9UBN7 1215 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 SEL1LQ9UBV2 794 aa4.94□□□□□ -1.62
UBE2D3-225ENST00000508476 TRIP12Q14669 1992 aaPredicted RBP4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 TMEM247A6NEH6 219 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 VWA5AO00534 786 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 DPP6P42658 865 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 PTPN9P43378 593 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 MVDP53602 400 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 TRAF3Q13114 568 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 SHBQ15464 509 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 RUNDC3AQ59EK9 446 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 TMEM268Q5VZI3 342 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 PRSS57Q6UWY2 283 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 OR6Y1Q8NGX8 325 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 SLC35F5Q8WV83 523 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 ZNF333Q96JL9 665 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 TMLHEQ9NVH6 421 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 NLKQ9UBE8 527 aa4.93□□□□□ -1.62
UBE2D3-225ENST00000508476 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 ACOT8O14734 319 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 RNMTO43148 476 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 CCNT1O60563 726 aaKnown RBP4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 CBX6O95503 412 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 PPP1R3DO95685 299 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 GLUD1P00367 558 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 PRSS2P07478 247 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 ZNF12P17014 697 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 CD72P21854 359 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 RFC1P35251 1148 aaPredicted RBP4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 PNPLA4P41247 253 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 MTNR1AP48039 350 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 GLUD2P49448 558 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 CLCN5P51795 746 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 IL13RA2Q14627 380 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 AADACL2Q6P093 401 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 CLIP4Q8N3C7 705 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 RILPL2Q969X0 211 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 TM6SF1Q9BZW5 370 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 CTDSP1Q9GZU7 261 aa4.92□□□□□ -1.62
UBE2D3-225ENST00000508476 NOTCH4Q99466 2003 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 C17orf102A2RUQ5 167 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 EME2A4GXA9 379 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 SOX30O94993 753 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 MYZAPP0CAP1 466 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 CHKAP35790 457 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 NUDT6P53370 316 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 RRP1P56182 461 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 THOC5Q13769 683 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 BYSLQ13895 437 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 MYBPC2Q14324 1141 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 IZUMO4Q1ZYL8 232 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 TDRD12Q587J7 1177 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 SH2D4BQ5SQS7 431 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 FAM83BQ5T0W9 1011 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.91□□□□□ -1.624e-6■■■□□ 19.2
UBE2D3-225ENST00000508476 RINLQ6ZS11 566 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 ARMC9Q7Z3E5 817 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 FJX1Q86VR8 437 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 ZDHHC23Q8IYP9 409 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 GPT2Q8TD30 523 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 TMED6Q8WW62 240 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 RUBCNQ92622 972 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 ATOH1Q92858 354 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 TEFMQ96QE5 360 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 GFM1Q96RP9 751 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 C6orf106Q9H6K1 298 aaPredicted RBP4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 CHODLQ9H9P2 273 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 DHDHQ9UQ10 334 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 PCDHGB1Q9Y5G3 927 aa4.91□□□□□ -1.62
UBE2D3-225ENST00000508476 STRNO43815 780 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms