RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 A0A1W2PP55 124 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 BCLAF3A2AJT9 711 aaKnown RBP20.24■□□□□ 0.83
DDR1-259ENST00000507046 SPOPO43791 374 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 RNASEH2AO75792 299 aaKnown RBP20.24■□□□□ 0.83
DDR1-259ENST00000507046 CD160O95971 181 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 PRNPP04156 253 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 AMPD1P23109 780 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 CHRNA3P32297 505 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 ZNF33AQ06730 810 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 DPYSL3Q14195 570 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 SYCP2LQ5T4T6 812 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 AFMIDQ63HM1 303 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 LEKR1Q6ZMV7 388 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 TMEM139Q8IV31 216 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 DEFB119Q8N690 84 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 NPWQ8N729 165 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 CADM4Q8NFZ8 388 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 PIP4K2CQ8TBX8 421 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 TM6SF2Q9BZW4 377 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 KLC2Q9H0B6 622 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 PCED1AQ9H1Q7 454 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 SP110Q9HB58 689 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 KLHL11Q9NVR0 708 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 UBA2Q9UBT2 640 aaPredicted RBP20.24■□□□□ 0.83
DDR1-259ENST00000507046 PPM1HQ9ULR3 514 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 ACTL7AQ9Y615 435 aa20.24■□□□□ 0.83
DDR1-259ENST00000507046 MEI4A8MW99 385 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 TMCC1O94876 653 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 SEMA4FO95754 770 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 PTGER3P43115 390 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 PAPOLAP51003 745 aaKnown RBP20.23■□□□□ 0.83
DDR1-259ENST00000507046 ARSEP51690 589 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 VAV2P52735 878 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 SNRPD1P62314 119 aaKnown RBP20.23■□□□□ 0.83
DDR1-259ENST00000507046 ATP13A4Q4VNC1 1196 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 INO80DQ53TQ3 878 aaPredicted RBP20.23■□□□□ 0.83
DDR1-259ENST00000507046 ODF2Q5BJF6 829 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 CARD16Q5EG05 197 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 DPY19L3Q6ZPD9 716 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 KIAA1328Q86T90 577 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 ARHGAP12Q8IWW6 846 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 HDDC3Q8N4P3 179 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 ACRBPQ8NEB7 543 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 GRIN3AQ8TCU5 1115 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 CALR3Q96L12 384 aaKnown RBP20.23■□□□□ 0.83
DDR1-259ENST00000507046 GRPEL1Q9HAV7 217 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 DYRK4Q9NR20 520 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 SEMA4GQ9NTN9 838 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 IL36AQ9UHA7 158 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 TFR2Q9UP52 801 aa20.23■□□□□ 0.83
DDR1-259ENST00000507046 OTOGLQ3ZCN5 2332 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 PIEZO1Q92508 2521 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 GPR179Q6PRD1 2367 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 GOLGA6L3A6NEY3 463 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 FOXD2O60548 495 aaPredicted RBP20.22■□□□□ 0.83
DDR1-259ENST00000507046 PRAMEF11O60813 436 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 ZNF821O75541 412 aaPredicted RBP20.22■□□□□ 0.83
DDR1-259ENST00000507046 GSRP00390 522 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 CD48P09326 243 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 ACSL1P33121 698 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 CCNHP51946 323 aaPredicted RBP20.22■□□□□ 0.83
DDR1-259ENST00000507046 MMRN1Q13201 1228 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 CSRP2Q16527 193 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 WDR45BQ5MNZ6 344 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 LRRC38Q5VT99 294 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 SLC41A1Q8IVJ1 513 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 RHOT1Q8IXI2 618 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 PLPP6Q8IY26 295 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 ABCA7Q8IZY2 2146 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 RYBPQ8N488 228 aaPredicted RBP20.22■□□□□ 0.83
DDR1-259ENST00000507046 AADATQ8N5Z0 425 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 CHST14Q8NCH0 376 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 TMIEQ8NEW7 156 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 OR2AP1Q8NGE2 309 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 PIGKQ92643 395 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 ZNF419Q96HQ0 510 aaPredicted RBP20.22■□□□□ 0.83
DDR1-259ENST00000507046 PPP1R16AQ96I34 528 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 GDAP1L1Q96MZ0 367 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 HEPHQ9BQS7 1158 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 PDFQ9HBH1 243 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 VPS45Q9NRW7 570 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 ETNK2Q9NVF9 386 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 SERGEFQ9UGK8 458 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 SARDHQ9UL12 918 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 MFHAS1Q9Y4C4 1052 aa20.22■□□□□ 0.83
DDR1-259ENST00000507046 LRRD1A4D1F6 860 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 KPNA3O00505 521 aaPredicted RBP20.21■□□□□ 0.83
DDR1-259ENST00000507046 BUB1BO60566 1050 aaPredicted RBP20.21■□□□□ 0.83
DDR1-259ENST00000507046 IGSF6O95976 241 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 KRT1P04264 644 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 CTSLP07711 333 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 COMTP21964 271 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 HOXD12P35452 270 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 NAP1L1P55209 391 aaKnown RBP20.21■□□□□ 0.83
DDR1-259ENST00000507046 RHOAP61586 193 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 CCDC15Q0P6D6 951 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 ANKRD20A8PQ5CZ79 823 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 C11orf63Q6NUN7 778 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 SYT12Q8IV01 421 aa20.21■□□□□ 0.83
DDR1-259ENST00000507046 RGL4Q8IZJ4 473 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms