RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 MATN3O15232 486 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 BUB1O43683 1085 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 LILRB5O75023 590 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 SOCS5O75159 536 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 STK10O94804 968 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 KLF8O95600 359 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 IGSF6O95976 241 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 SRCP12931 536 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 TDGF1P13385 188 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 TCP1P17987 556 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 MZF1P28698 734 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 STIP1P31948 543 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 TIE1P35590 1138 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 RPL26P61254 145 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 POLR2LP62875 67 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 IFI35P80217 286 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 LMNB2Q03252 620 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 DLG2Q15700 870 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 CA9Q16790 459 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 USP39Q53GS9 565 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 EGFLAMQ63HQ2 1017 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 NCBP2-AS2Q69YL0 99 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 C22orf39Q6P5X5 142 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 ARHGAP12Q8IWW6 846 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 PYROXD2Q8N2H3 581 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 PLD5Q8N7P1 536 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 ATP11CQ8NB49 1132 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 TXNDC5Q8NBS9 432 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 CADM4Q8NFZ8 388 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 OR2AP1Q8NGE2 309 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 RAPGEF5Q92565 580 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 PRCCQ92733 491 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 TRIM44Q96DX7 344 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 MYEOVQ96EZ4 313 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 RUNDC3BQ96NL0 473 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 HDAC8Q9BY41 377 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 NOL6Q9H6R4 1146 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 SGK2Q9HBY8 427 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 USP36Q9P275 1121 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 DNAI1Q9UI46 699 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 TRHDEQ9UKU6 1024 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 CLEC4EQ9ULY5 219 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 RPL26L1Q9UNX3 145 aaKnown RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 NCKAP1Q9Y2A7 1128 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 MTF2Q9Y483 593 aaPredicted RBP8.62□□□□□ -1.03
PDGFC-205ENST00000506880 DUSP10Q9Y6W6 482 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 PI4KAP42356 2102 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 CEP192Q8TEP8 1941 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 A0A0D9SEW6 157 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 A0A1W2PQF6 199 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 TMEM110-MUSTN1A8MSY1 372 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 PROB1E7EW31 1015 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 K7ESF4 209 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 CBX4O00257 560 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 SCAMP3O14828 347 aaKnown RBP8.61□□□□□ -1.03
PDGFC-205ENST00000506880 AXIN1O15169 862 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 AP1G1O43747 822 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 MAFKO60675 156 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 LRP3O75074 770 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 ADAM23O75077 832 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 EPHX1P07099 455 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 DCNP07585 359 aaKnown RBP8.61□□□□□ -1.03
PDGFC-205ENST00000506880 ACADMP11310 421 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 CD72P21854 359 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 AMPD1P23109 780 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 IL12RB1P42701 662 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 PAPOLAP51003 745 aaKnown RBP8.61□□□□□ -1.03
PDGFC-205ENST00000506880 ARF5P84085 180 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 GAS6Q14393 721 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 C2orf27AQ580R0 203 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 CARD16Q5EG05 197 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 C9orf64Q5T6V5 341 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 IER5LQ5T953 404 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 MARC1Q5VT66 337 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 TXNRD3NBQ6F5E7 133 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 BRAT1Q6PJG6 821 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 MFSD7Q6UXD7 560 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 REXO1L1PQ8IX06 675 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 APCDD1Q8J025 514 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 NDUFAF2Q8N183 169 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 ALLCQ8N6M5 410 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 PQLC3Q8N755 202 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 TTC8Q8TAM2 541 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 ATRIPQ8WXE1 791 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 PTPRN2Q92932 1015 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 FOXJ1Q92949 421 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 BHMTQ93088 406 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 HMCESQ96FZ2 354 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 P2RY11Q96G91 374 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 ZC3H10Q96K80 434 aaKnown RBP8.61□□□□□ -1.03
PDGFC-205ENST00000506880 MGME1Q9BQP7 344 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 HEPHQ9BQS7 1158 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 POLR1EQ9GZS1 481 aaKnown RBP8.61□□□□□ -1.03
PDGFC-205ENST00000506880 KCNF1Q9H3M0 494 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 LZTFL1Q9NQ48 299 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 PRSS16Q9NQE7 514 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 ITM2CQ9NQX7 267 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 VPS45Q9NRW7 570 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 DTLQ9NZJ0 730 aa8.61□□□□□ -1.03
PDGFC-205ENST00000506880 PCDHGA5Q9Y5G8 931 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms