RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 BCLAF3A2AJT9 711 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 J3KR12 359 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 ALOX15BO15296 676 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 BUB1O43683 1085 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 BUB1BO60566 1050 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 ADH1BP00325 375 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 IL1BP01584 269 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 OXTRP30559 389 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 SLC8A1P32418 973 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 ACSL1P33121 698 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 DRD3P35462 400 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 PAPOLAP51003 745 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 FOXK2Q01167 660 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 SPEM2Q0P670 501 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 CCDC6Q16204 474 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 SPDYCQ5MJ68 293 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 DPY19L3Q6ZPD9 716 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 ARHGAP36Q6ZRI8 547 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 USP30Q70CQ3 517 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 PCDH20Q8N6Y1 951 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 VOPP1Q96AW1 172 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 FBXL12Q9NXK8 326 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 RCOR3Q9P2K3 495 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 PPM1HQ9ULR3 514 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 SCML1Q9UN30 329 aa18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 ZSCAN5CA6NGD5 496 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 PLK4O00444 970 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 PRAMEF11O60813 436 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 TMCC1O94876 653 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 KRT7P08729 469 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 COMTP21964 271 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 MPLP40238 635 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 NOP2P46087 812 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 GEMIN4P57678 1058 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 CREB5Q02930 508 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 POM121L1PQ3SYA9 428 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 PLA2G2CQ5R387 149 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 TMCO3Q6UWJ1 677 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 CYP2U1Q7Z449 544 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 PCDH19Q8TAB3 1148 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 PIP4K2CQ8TBX8 421 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 RAPGEF5Q92565 580 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 ISG20Q96AZ6 181 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 FAF2Q96CS3 445 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 HSPA12BQ96MM6 686 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 DESI2Q9BSY9 194 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 TM6SF2Q9BZW4 377 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 LACRTQ9GZZ8 138 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 SMOC1Q9H4F8 434 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 GRPEL1Q9HAV7 217 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 LUC7LQ9NQ29 371 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 PCDHGA5Q9Y5G8 931 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 WASF2Q9Y6W5 498 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 DUSP10Q9Y6W6 482 aa18.58■□□□□ 0.56
PDLIM7-216ENST00000506537 PTPRZ1P23471 2315 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 ATXN2Q99700 1313 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 A0A0U1RQJ8 604 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 ARHGAP42A6NI28 874 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 DFFAO00273 331 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 NDUFS2O75306 463 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 RNASEH2AO75792 299 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 C5AR1P21730 350 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 ITPKAP23677 461 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 CHRNA3P32297 505 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 CCNHP51946 323 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 VAV2P52735 878 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 ZNF33AQ06730 810 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 PDK2Q15119 407 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 CARD16Q5EG05 197 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 LYSMD4Q5XG99 296 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 DSG4Q86SJ6 1040 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 LZTR1Q8N653 840 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 KCTD6Q8NC69 237 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 GRIN3AQ8TCU5 1115 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 FAM131CQ96AQ9 280 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 ZNF419Q96HQ0 510 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 CCDC114Q96M63 670 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 ZNF670Q9BS34 389 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 CALN1Q9BXU9 219 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 NEUROG2Q9H2A3 272 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 C6orf106Q9H6K1 298 aaPredicted RBP18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 SEMA4GQ9NTN9 838 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 TMEM74BQ9NUR3 256 aa18.57■□□□□ 0.56
PDLIM7-216ENST00000506537 RALGAPA1Q6GYQ0 2036 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 C3orf70A6NLC5 250 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 GOLGA6L6A8MZA4 724 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 PJA2O43164 708 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 MFSD11O43934 449 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 LRP3O75074 770 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 IPO7O95373 1038 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 GKP32189 559 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 SLC1A1P43005 524 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 DNA2P51530 1060 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 GSDMDP57764 484 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 CYTH1Q15438 398 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 INO80DQ53TQ3 878 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 ANKRD20A8PQ5CZ79 823 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 ATXN7L2Q5T6C5 722 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 LRRC38Q5VT99 294 aa18.56■□□□□ 0.56
PDLIM7-216ENST00000506537 NCBP2-AS2Q69YL0 99 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms