RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ETFBP38117 255 aa18.19■□□□□ 0.5
SMN1-204ENST00000506163 YBEYP58557 167 aaPredicted RBP18.19■□□□□ 0.5
SMN1-204ENST00000506163 PEAR1Q5VY43 1037 aaPredicted RBP18.19■□□□□ 0.5
SMN1-204ENST00000506163 USP30Q70CQ3 517 aa18.19■□□□□ 0.5
SMN1-204ENST00000506163 FAM71BQ8TC56 605 aa18.19■□□□□ 0.5
SMN1-204ENST00000506163 OR8D1Q8WZ84 308 aa18.19■□□□□ 0.5
SMN1-204ENST00000506163 CSPG4P5Q96PW8 444 aa18.19■□□□□ 0.5
SMN1-204ENST00000506163 KNL1Q8NG31 2342 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 CXorf51AA0A1B0GTR3 108 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 TMEM110-MUSTN1A8MSY1 372 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 C5AR1P21730 350 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 CHRNA3P32297 505 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 SSR1P43307 286 aaKnown RBP18.18■□□□□ 0.5
SMN1-204ENST00000506163 MMRN1Q13201 1228 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 MESDQ14696 234 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 TCEAL1Q15170 157 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 PARP15Q460N3 678 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 ARHGAP36Q6ZRI8 547 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 SYT12Q8IV01 421 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 HDDC3Q8N4P3 179 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 GPR161Q8N6U8 529 aaKnown RBP18.18■□□□□ 0.5
SMN1-204ENST00000506163 CADM4Q8NFZ8 388 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 PIP4K2CQ8TBX8 421 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 FAM131CQ96AQ9 280 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 CEP44Q9C0F1 390 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 BTBD1Q9H0C5 482 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 VPS45Q9NRW7 570 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 INTUQ9ULD6 942 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 SCML1Q9UN30 329 aa18.18■□□□□ 0.5
SMN1-204ENST00000506163 J3KR12 359 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 ALOX15BO15296 676 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 DAPK3O43293 454 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 BUB1O43683 1085 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 RNASEH2AO75792 299 aaKnown RBP18.17■□□□□ 0.5
SMN1-204ENST00000506163 SEMA4FO95754 770 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 ADH1BP00325 375 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 CDC25BP30305 580 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 GKP32189 559 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 MAGEA1P43355 309 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 PAPOLAP51003 745 aaKnown RBP18.17■□□□□ 0.5
SMN1-204ENST00000506163 NDST2P52849 883 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 IRX4P78413 519 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 TTC31Q49AM3 519 aaPredicted RBP18.17■□□□□ 0.5
SMN1-204ENST00000506163 CARD16Q5EG05 197 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 DCAF12L1Q5VU92 463 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 RAD9BQ6WBX8 426 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 TMEM139Q8IV31 216 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 CCDC170Q8IYT3 715 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 GANCQ8TET4 914 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 RFFLQ8WZ73 363 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 DNASE2BQ8WZ79 361 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 ISG20Q96AZ6 181 aaKnown RBP18.17■□□□□ 0.5
SMN1-204ENST00000506163 ARRDC3Q96B67 414 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 OMDQ99983 421 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 TM6SF2Q9BZW4 377 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 PDFQ9HBH1 243 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 SGK2Q9HBY8 427 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 FSCN3Q9NQT6 498 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 REXO2Q9Y3B8 237 aaKnown RBP18.17■□□□□ 0.5
SMN1-204ENST00000506163 PCDHA13Q9Y5I0 950 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 WASF2Q9Y6W5 498 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 DNAH14Q0VDD8 3507 aa18.17■□□□□ 0.5
SMN1-204ENST00000506163 RCCD1A6NED2 376 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 MAN1A1P33908 653 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 GJC1P36383 396 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 DNA2P51530 1060 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 ZNF135P52742 658 aaPredicted RBP18.16■□□□□ 0.5
SMN1-204ENST00000506163 CNTN1Q12860 1018 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 CYTH1Q15438 398 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 ARSIQ5FYB1 569 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.16■□□□□ 0.5
SMN1-204ENST00000506163 ZNF354CQ86Y25 554 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 PCDH20Q8N6Y1 951 aaKnown RBP18.16■□□□□ 0.5
SMN1-204ENST00000506163 SPC24Q8NBT2 197 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 OR6K2Q8NGY2 324 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 C1orf216Q8TAB5 229 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 FOXJ1Q92949 421 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 ORAI3Q9BRQ5 295 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 EBF2Q9HAK2 575 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 HPCAL4Q9UM19 191 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 EPN1Q9Y6I3 576 aaPredicted RBP18.16■□□□□ 0.5
SMN1-204ENST00000506163 DOCK9Q9BZ29 2069 aa18.16■□□□□ 0.5
SMN1-204ENST00000506163 H3BRJ5 948 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 PRAMEF11O60813 436 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 LEFTY1O75610 366 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 TMCC1O94876 653 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 CCNHP51946 323 aaPredicted RBP18.15■□□□□ 0.5
SMN1-204ENST00000506163 CDH6P55285 790 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 DPYSL3Q14195 570 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 HADHQ16836 314 aaKnown RBP18.15■□□□□ 0.5
SMN1-204ENST00000506163 ATXN7L2Q5T6C5 722 aaPredicted RBP18.15■□□□□ 0.5
SMN1-204ENST00000506163 AGBL4Q5VU57 503 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 NCEH1Q6PIU2 408 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 TMTC1Q8IUR5 882 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 RHOT2Q8IXI1 618 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 TMIEQ8NEW7 156 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 GRIN3AQ8TCU5 1115 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 RAPGEF5Q92565 580 aa18.15■□□□□ 0.5
SMN1-204ENST00000506163 BIRC7Q96CA5 298 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms