RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 ATP6V0D2Q8N8Y2 350 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 FAM181AQ8N9Y4 354 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 ZNF548Q8NEK5 533 aaPredicted RBP10.58□□□□□ -0.72
BRIX1-202ENST00000506023 GRIN3AQ8TCU5 1115 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 STK32AQ8WU08 396 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 SNRNP27Q8WVK2 155 aaKnown RBP10.58□□□□□ -0.72
BRIX1-202ENST00000506023 ATXN7L3BQ96GX2 97 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 ZNF578Q96N58 590 aaPredicted RBP10.58□□□□□ -0.72
BRIX1-202ENST00000506023 RPRD1AQ96P16 312 aaPredicted RBP10.58□□□□□ -0.72
BRIX1-202ENST00000506023 KLF6Q99612 283 aaPredicted RBP10.58□□□□□ -0.72
BRIX1-202ENST00000506023 TSG101Q99816 390 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 INTS2Q9H0H0 1204 aaKnown RBP10.58□□□□□ -0.72
BRIX1-202ENST00000506023 TNKS2Q9H2K2 1166 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 THAP9Q9H5L6 903 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 FAM204AQ9H8W3 233 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 PIGVQ9NUD9 493 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 DDIT4Q9NX09 232 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 VPS28Q9UK41 221 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 MAN1B1Q9UKM7 699 aa10.58□□□□□ -0.72
BRIX1-202ENST00000506023 TPX2Q9ULW0 747 aaKnown RBP10.58□□□□□ -0.72
BRIX1-202ENST00000506023 C1QTNF3-AMACRE9PGA6 284 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 KPNA3O00505 521 aaPredicted RBP10.57□□□□□ -0.72
BRIX1-202ENST00000506023 SCAMP1O15126 338 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 KLK10O43240 276 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 ZMPSTE24O75844 475 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 ENDOD1O94919 500 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 HSP90AA1P07900 732 aaKnown RBP10.57□□□□□ -0.72
BRIX1-202ENST00000506023 PNMA6AP0CW24 399 aaPredicted RBP10.57□□□□□ -0.72
BRIX1-202ENST00000506023 KRT5P13647 590 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 HNRNPA2B1P22626 353 aaKnown RBP10.57□□□□□ -0.72
BRIX1-202ENST00000506023 GKP32189 559 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 ACADSBP45954 432 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 TMPRSS3P57727 454 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 EIF2B5Q13144 721 aaKnown RBP10.57□□□□□ -0.72
BRIX1-202ENST00000506023 CDKN3Q16667 212 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 PTPN20Q4JDL3 420 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 RAB6CQ53S08 254 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 TAF1BQ53T94 588 aaPredicted RBP10.57□□□□□ -0.72
BRIX1-202ENST00000506023 ARSIQ5FYB1 569 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 FAM46CQ5VWP2 391 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 DPY19L3Q6ZPD9 716 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 Q6ZSR6 202 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 CCDC117Q8IWD4 279 aaPredicted RBP10.57□□□□□ -0.72
BRIX1-202ENST00000506023 OR7D4Q8NG98 312 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 IFI44Q8TCB0 444 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 KCNE4Q8WWG9 221 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 GSDMAQ96QA5 445 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 MED15Q96RN5 788 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 RAB6CQ9H0N0 254 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 POLR1BQ9H9Y6 1135 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 DNAJC28Q9NX36 388 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 NLGN3Q9NZ94 848 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 MPP6Q9NZW5 540 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 SLC25A13Q9UJS0 675 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 ITM2BQ9Y287 266 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 DOPEY2Q9Y3R5 2298 aa10.57□□□□□ -0.72
BRIX1-202ENST00000506023 ARHGEF17Q96PE2 2063 aaPredicted RBP10.57□□□□□ -0.72
BRIX1-202ENST00000506023 CDRT15L2A8MXV6 281 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 SART1O43290 800 aaKnown RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 THAP12O43422 761 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 MAGEC1O60732 1142 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 GCATO75600 419 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 LEFTY1O75610 366 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 CELA2BP08218 269 aaPredicted RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 NME1P15531 152 aaKnown RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 ZNF18P17022 549 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 SLC9A1P19634 815 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 GNA15P30679 374 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 CCR1P32246 355 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 NUDT1P36639 197 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 NNMTP40261 264 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 ABL2P42684 1182 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 STX17P56962 302 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 ERVPABLB-1P60509 514 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 NUCB2P80303 420 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 ARF5P84085 180 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 NME3Q13232 169 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 DEFB133Q30KQ1 61 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 CCDC40Q4G0X9 1142 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 RABGAP1LQ5R372 815 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 TTC39BQ5VTQ0 682 aaPredicted RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 KLHL10Q6JEL2 608 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 C22orf39Q6P5X5 142 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 ERN2Q76MJ5 926 aaKnown RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 PARS2Q7L3T8 475 aaKnown RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 PTAR1Q7Z6K3 402 aaPredicted RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 DSG4Q86SJ6 1040 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 EXD3Q8N9H8 876 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 C1orf131Q8NDD1 294 aaKnown RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 TMIEQ8NEW7 156 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 FUBP1Q96AE4 644 aaKnown RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 CEP63Q96MT8 703 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 DEPDC7Q96QD5 511 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 CRACR2AQ9BSW2 395 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 GTPBP4Q9BZE4 634 aaKnown RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 SIK2Q9H0K1 926 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 UBE2TQ9NPD8 197 aaPredicted RBP10.56□□□□□ -0.72
BRIX1-202ENST00000506023 PLCB1Q9NQ66 1216 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 ARHGEF38Q9NXL2 777 aa10.56□□□□□ -0.72
BRIX1-202ENST00000506023 FADS3Q9Y5Q0 445 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms