RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 FBXL22Q6P050 247 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 LRRC31Q6UY01 552 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 KYAT3Q6YP21 454 aaKnown RBP10.14□□□□□ -0.79
NEDD9-210ENST00000505589 KRBA2Q6ZNG9 492 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 EFL1Q7Z2Z2 1120 aaKnown RBP10.14□□□□□ -0.79
NEDD9-210ENST00000505589 PTAR1Q7Z6K3 402 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-210ENST00000505589 SETD3Q86TU7 594 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-210ENST00000505589 ASB12Q8WXK4 309 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 TFAP2BQ92481 460 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 TMEM159Q96B96 161 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 SGF29Q96ES7 293 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 ATXN7L3BQ96GX2 97 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 SPATA32Q96LK8 384 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 NOX5Q96PH1 765 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 ASNSD1Q9NWL6 643 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 CHMP5Q9NZZ3 219 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 IL36AQ9UHA7 158 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 HOOK1Q9UJC3 728 aaKnown RBP10.14□□□□□ -0.79
NEDD9-210ENST00000505589 ATXN7L1Q9ULK2 861 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-210ENST00000505589 ATP6V1DQ9Y5K8 247 aa10.14□□□□□ -0.79
NEDD9-210ENST00000505589 TP53BP1Q12888 1972 aaPredicted RBP10.14□□□□□ -0.79
NEDD9-210ENST00000505589 FAM237AA0A1B0GTK4 181 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 CXorf51AA0A1B0GTR3 108 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 TSPAN6O43657 245 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 AP1G1O43747 822 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 AFPP02771 609 aaKnown RBP10.13□□□□□ -0.79
NEDD9-210ENST00000505589 ANXA6P08133 673 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 SRCP12931 536 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 VAV1P15498 845 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 PRLRP16471 622 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 JUNDP17535 347 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 FMO5P49326 533 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 THOP1P52888 689 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 TAS2R38P59533 333 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 YPEL5P62699 121 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 DNM1Q05193 864 aaKnown RBP10.13□□□□□ -0.79
NEDD9-210ENST00000505589 NFATC3Q12968 1075 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 EIF4EBP2Q13542 120 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-210ENST00000505589 AUHQ13825 339 aaKnown RBP10.13□□□□□ -0.79
NEDD9-210ENST00000505589 KIAA1614Q5VZ46 1190 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 FOXR1Q6PIV2 292 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 LVRNQ6Q4G3 990 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 Q6ZVU0 165 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 ENOSF1Q7L5Y1 443 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 TAC4Q86UU9 113 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 FBXO39Q8N4B4 442 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 UBR7Q8N806 425 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 DENND6BQ8NEG7 585 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 ZNF548Q8NEK5 533 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-210ENST00000505589 LMX1AQ8TE12 382 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 CLEC4CQ8WTT0 213 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 KLK6Q92876 244 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 ALG14Q96F25 216 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 LIN37Q96GY3 246 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-210ENST00000505589 BMFQ96LC9 184 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 TMEM74Q96NL1 305 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 PRMT1Q99873 361 aaKnown RBP10.13□□□□□ -0.79
NEDD9-210ENST00000505589 C1QTNF7Q9BXJ2 289 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 SLC13A1Q9BZW2 595 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 CEP44Q9C0F1 390 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 SCAND2PQ9GZW5 306 aaPredicted RBP10.13□□□□□ -0.79
NEDD9-210ENST00000505589 WDCPQ9H6R7 721 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 FAM204AQ9H8W3 233 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 WDR70Q9NW82 654 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 ACSL6Q9UKU0 697 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 DOLKQ9UPQ8 538 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 MGAQ8IWI9 3026 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 ATMQ13315 3056 aa10.13□□□□□ -0.79
NEDD9-210ENST00000505589 NEMP1O14524 444 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 PLD2O14939 933 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 NVLO15381 856 aaKnown RBP10.12□□□□□ -0.79
NEDD9-210ENST00000505589 ZW10O43264 779 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 NEBLO76041 1014 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 ZNF202O95125 648 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 SMC2O95347 1197 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 GNA14O95837 355 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 IGLV3-25P01717 112 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 RHOCP08134 193 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 BRD2P25440 801 aaKnown RBP10.12□□□□□ -0.79
NEDD9-210ENST00000505589 CD82P27701 267 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 NOS2P35228 1153 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 CLN3Q13286 438 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 PDE1CQ14123 709 aaPredicted RBP10.12□□□□□ -0.79
NEDD9-210ENST00000505589 ELOCQ15369 112 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 C5orf22Q49AR2 442 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 TMEM259Q4ZIN3 620 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 ARSIQ5FYB1 569 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 C6orf132Q5T0Z8 1188 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 ZNF658Q5TYW1 1059 aaPredicted RBP10.12□□□□□ -0.79
NEDD9-210ENST00000505589 TMEM164Q5U3C3 297 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
NEDD9-210ENST00000505589 CXorf57Q6NSI4 855 aaKnown RBP10.12□□□□□ -0.79
NEDD9-210ENST00000505589 ZNF783Q6ZMS7 281 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 GCNT7Q6ZNI0 430 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 RAB11FIP2Q7L804 512 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 PLPP6Q8IY26 295 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 SLC22A18ASQ8N1D0 253 aa10.12□□□□□ -0.79
NEDD9-210ENST00000505589 FSTL5Q8N475 847 aaPredicted RBP10.12□□□□□ -0.79
NEDD9-210ENST00000505589 EHBP1Q8NDI1 1231 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms