RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SCARB2Q14108 478 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CNGA3Q16281 694 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ZNF667Q5HYK9 610 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 C1orf141Q5JVX7 400 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 NAPEPLDQ6IQ20 393 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TMEM200AQ86VY9 491 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 POC5Q8NA72 575 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 AVL9Q8NBF6 648 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 AFAP1L1Q8TED9 768 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PBKQ96KB5 322 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 STRA6Q9BX79 667 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ADGRE3Q9BY15 652 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CADM1Q9BY67 442 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TRIM2Q9C040 744 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 FBRSL1Q9HCM7 1045 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 SLC2A4RGQ9NR83 387 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 SPATS2LQ9NUQ6 558 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 BABAM1Q9NWV8 329 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TAB2Q9NYJ8 693 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PTGFRNQ9P2B2 879 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 MARCH4Q9P2E8 410 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CPSF2Q9P2I0 782 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ZNF112Q9UJU3 913 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 FZD4Q9ULV1 537 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 B3GNT3Q9Y2A9 372 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 SESN1Q9Y6P5 492 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 RPGRIP1LQ68CZ1 1315 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 A0A1W2PRG0 241 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 A8MV72 311 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 FOXN1O15353 648 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 YY2O15391 372 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 LPXNO60711 386 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 PAGE4O60829 102 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 TACC1O75410 805 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 OR2C1O95371 312 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 HLA-DQA2P01906 255 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 MBPP02686 304 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 QDPRP09417 244 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 MSH2P43246 934 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 CLK3P49761 638 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 BLKP51451 505 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 ADPRHP54922 357 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 RRP1P56182 461 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 WDR5P61964 334 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 FAM189BP81408 668 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 B4GALNT1Q00973 533 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 GUCY1B3Q02153 619 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 SOS1Q07889 1333 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 LMAN2Q12907 356 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 CSTF3Q12996 717 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 IRF3Q14653 427 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 KYNUQ16719 465 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 SPATA31A1Q5TZJ5 1347 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 C17orf99Q6UX52 265 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 IL20RBQ6UXL0 311 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 ZNF551Q7Z340 670 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 ADGRF3Q8IZF5 1079 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 SCML4Q8N228 414 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 GHDCQ8N2G8 530 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 SETD9Q8NE22 299 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 MAFAQ8NHW3 353 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 GABPB2Q8TAK5 448 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 C2CD4CQ8TF44 421 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 EDC3Q96F86 508 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 FBXL20Q96IG2 436 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 H2AFJQ9BTM1 129 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 APOL6Q9BWW8 343 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 SLC32A1Q9H598 525 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 ZNF768Q9H5H4 540 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 ENTPD7Q9NQZ7 604 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 RRP7BPQ9NSQ0 103 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 NCKIPSDQ9NZQ3 722 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 KIAA1456Q9P272 454 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 HSPB7Q9UBY9 170 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 DHDHQ9UQ10 334 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 ADAM18Q9Y3Q7 739 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 PKP3Q9Y446 797 aa4.11□□□□□ -1.75
TRAPPC13-208ENST00000505553 AOX1Q06278 1338 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 ARHGAP10A1A4S6 786 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 OR6C68A6NDL8 312 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 A8MZ25 164 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 MCIDASD6RGH6 385 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 SCAMP1O15126 338 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 LDLRAD4O15165 306 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 TP73O15350 636 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 ADAM20O43506 726 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 PEX1O43933 1283 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 ENTPD3O75355 529 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 IPO7O95373 1038 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 AFPP02771 609 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 RB1P06400 928 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 NPSP0C0P6 89 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 LAG3P18627 525 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 SFPQP23246 707 aaKnown RBP eCLIP4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 POU1F1P28069 291 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 NDUFS1P28331 727 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 ADRA1BP35368 520 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 STAT6P42226 847 aa4.1□□□□□ -1.75
TRAPPC13-208ENST00000505553 GABRB2P47870 512 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms