RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 FBXL12Q9NXK8 326 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF212Q9UDV6 495 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 IL36AQ9UHA7 158 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 EVLQ9UI08 416 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-220ENST00000505005 SLCO3A1Q9UIG8 710 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 HCN2Q9UL51 889 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 DMTF1Q9Y222 760 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 MFHAS1Q9Y4C4 1052 aa10.05□□□□□ -0.8
NR1I3-220ENST00000505005 A0A0D9SEW6 157 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 METTL12A8MUP2 240 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 MEI4A8MW99 385 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 TTC34A8MYJ7 566 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 ARHGAP6O43182 974 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 GJB6O95452 261 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 SEMA4FO95754 770 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 CHRNA3P32297 505 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 PXNP49023 591 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 NR2C2P49116 596 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 CCR5P51681 352 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 ATXN3P54252 364 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 COPS2P61201 443 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 OGDHQ02218 1023 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 CREB5Q02930 508 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 OVGP1Q12889 678 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 CFAP58Q5T655 872 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 KIAA1211LQ6NV74 962 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 C22orf39Q6P5X5 142 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 PRPF39Q86UA1 669 aaKnown RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 CIR1Q86X95 450 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 DNAAF5Q86Y56 855 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 RGL4Q8IZJ4 473 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 OR2AP1Q8NGE2 309 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 FRS2Q8WU20 508 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 SORCS1Q8WY21 1168 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 DNASE2BQ8WZ79 361 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 HSPH1Q92598 858 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 TOE1Q96GM8 510 aaKnown RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 RBM41Q96IZ5 413 aaKnown RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF641Q96N77 438 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 TUBGCP5Q96RT8 1024 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 C1QTNF7Q9BXJ2 289 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 HDAC8Q9BY41 377 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 PREBQ9HCU5 417 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 ANLNQ9NQW6 1124 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 SPTLC3Q9NUV7 552 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 UBA2Q9UBT2 640 aaPredicted RBP10.04□□□□□ -0.8
NR1I3-220ENST00000505005 SEPT3Q9UH03 358 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 PPM1HQ9ULR3 514 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 CYP8B1Q9UNU6 501 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 THADAQ6YHU6 1953 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 CHD5Q8TDI0 1954 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 RALGAPA1Q6GYQ0 2036 aa10.04□□□□□ -0.8
NR1I3-220ENST00000505005 A0A1B0GTW7 788 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 CCDC66A2RUB6 948 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 MIF4GDA9UHW6 222 aaKnown RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 FAM72CH0Y354 149 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 I6L893 689 aaPredicted RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 PJA2O43164 708 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 MTSS1O43312 755 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 PALMO75781 387 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 RNASEH2AO75792 299 aaKnown RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 ZMPSTE24O75844 475 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 ZRANB2O95218 330 aaKnown RBP eCLIP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 HLA-EP13747 358 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 MSNP26038 577 aaKnown RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 MPLP40238 635 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 VAV2P52735 878 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 LIMK1P53667 647 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 RHOAP61586 193 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 SLC25A11Q02978 314 aaKnown RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF252P-AS1Q0IIN9 211 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 ELP6Q0PNE2 266 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 HNRNPDQ14103 355 aaKnown RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 FAM72AQ5TYM5 149 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 PEAR1Q5VY43 1037 aaPredicted RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 FAM72DQ6L9T8 149 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 FBXL19Q6PCT2 694 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 SLC23A3Q6PIS1 610 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 DAAM2Q86T65 1068 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 FAM72BQ86X60 149 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 MMAAQ8IVH4 418 aaKnown RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 SFTPA1Q8IWL2 248 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 RCOR2Q8IZ40 523 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 HDDC3Q8N4P3 179 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 ATPAF2Q8N5M1 289 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 UBL4BQ8N7F7 174 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 OR7D4Q8NG98 312 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 PIP4K2CQ8TBX8 421 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 KIAA1524Q8TCG1 905 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 NETO1Q8TDF5 533 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 MYEOVQ96EZ4 313 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 FEM1CQ96JP0 617 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 CSPG4P5Q96PW8 444 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 FAM129BQ96TA1 746 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 PSMB7Q99436 277 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 CINPQ9BW66 212 aaPredicted RBP10.03□□□□□ -0.8
NR1I3-220ENST00000505005 CALN1Q9BXU9 219 aa10.03□□□□□ -0.8
NR1I3-220ENST00000505005 LRRC19Q9H756 370 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms