RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 NOTCH4Q99466 2003 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 A0A087WUV0 522 aaPredicted RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 GOLGA6L10A6NI86 522 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 GOLGA8MH3BSY2 632 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 J3KR12 359 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 TSPAN3O60637 253 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 TMEM63AO94886 807 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 LUC7L3O95232 432 aaKnown RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 SYF2O95926 243 aaKnown RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 RHOCP08134 193 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 PSMB4P28070 264 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 MAGEA3P43357 314 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 NSUN2Q08J23 767 aaKnown RBP eCLIP10.33□□□□□ -0.76
DDX41-203ENST00000504781 IFFO1Q0D2I5 559 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 HYAL1Q12794 435 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 ZBTB17Q13105 803 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 ADAM15Q13444 863 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 LBRQ14739 615 aaKnown RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 RASA2Q15283 850 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 SLC5A9Q2M3M2 681 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 TMEM31Q5JXX7 168 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 RNF219Q5W0B1 726 aaPredicted RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 RNF43Q68DV7 783 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 IL31Q6EBC2 164 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 NAPEPLDQ6IQ20 393 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 ARHGAP36Q6ZRI8 547 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 GPR149Q86SP6 731 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 METTL3Q86U44 580 aaKnown RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 ZBED8Q8IZ13 594 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 DDI1Q8WTU0 396 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 DEPDC1BQ8WUY9 529 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 USP13Q92995 863 aaPredicted RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 E2F7Q96AV8 911 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 SIGLEC10Q96LC7 697 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 PRICKLE1Q96MT3 831 aaPredicted RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 PWWP2AQ96N64 755 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 FEM1AQ9BSK4 669 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 LRFN3Q9BTN0 628 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 SLC2A11Q9BYW1 496 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 LRRC40Q9H9A6 602 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 LRRC4CQ9HCJ2 640 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 VPS45Q9NRW7 570 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 OBP2AQ9NY56 170 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 GDE1Q9NZC3 331 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 NINJ2Q9NZG7 142 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 FETUBQ9UGM5 382 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 CHD5Q8TDI0 1954 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 MYO18AQ92614 2054 aaKnown RBP10.33□□□□□ -0.76
DDX41-203ENST00000504781 BRWD1Q9NSI6 2320 aa10.33□□□□□ -0.76
DDX41-203ENST00000504781 SHROOM3Q8TF72 1996 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 MYO7AQ13402 2215 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 LINC01565O15544 149 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 EPOP01588 193 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 MYZAPP0CAP1 466 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 ACVRL1P37023 503 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 GEMIN4P57678 1058 aaKnown RBP10.32□□□□□ -0.76
DDX41-203ENST00000504781 NTHL1P78549 312 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 DLX2Q07687 328 aaPredicted RBP10.32□□□□□ -0.76
DDX41-203ENST00000504781 SLC10A7Q0GE19 358 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 MPP3Q13368 585 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 SLC14A2Q15849 920 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 BBS9Q3SYG4 887 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 MSS51Q4VC12 460 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 CEP85LQ5SZL2 805 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 STXBP5Q5T5C0 1151 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 CXorf57Q6NSI4 855 aaKnown RBP10.32□□□□□ -0.76
DDX41-203ENST00000504781 TMC5Q6UXY8 1006 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 RANBP10Q6VN20 620 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 ZNF354CQ86Y25 554 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 BBS7Q8IWZ6 715 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 TAB3Q8N5C8 712 aaPredicted RBP10.32□□□□□ -0.76
DDX41-203ENST00000504781 ATP11CQ8NB49 1132 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 ACDQ96AP0 544 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 TADA1Q96BN2 335 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 ALG14Q96F25 216 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 PGM2Q96G03 612 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 IMP4Q96G21 291 aaKnown RBP10.32□□□□□ -0.76
DDX41-203ENST00000504781 C9orf72Q96LT7 481 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 ZSWIM3Q96MP5 696 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 EBNA1BP2Q99848 306 aaKnown RBP10.32□□□□□ -0.76
DDX41-203ENST00000504781 SPON2Q9BUD6 331 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 TRPV4Q9HBA0 871 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 PDFQ9HBH1 243 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 ARNT2Q9HBZ2 717 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 TMBIM4Q9HC24 238 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 CASS4Q9NQ75 786 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 BFARQ9NZS9 450 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 SEPT3Q9UH03 358 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 OR51B4Q9Y5P0 310 aa10.32□□□□□ -0.76
DDX41-203ENST00000504781 DOCK6Q96HP0 2047 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 A0A0D9SEW6 157 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 HMGB1P1B2RPK0 211 aaPredicted RBP10.31□□□□□ -0.76
DDX41-203ENST00000504781 RASGRF2O14827 1237 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 IVLP07476 585 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 NFKB1P19838 968 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 FSHRP23945 695 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 LTBRP36941 435 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 ELK3P41970 407 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 SGSHP51688 502 aa10.31□□□□□ -0.76
DDX41-203ENST00000504781 ZNF844Q08AG5 666 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms