RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ACAD10Q6JQN1 1059 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 DPY19L3Q6ZPD9 716 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 KANSL1Q7Z3B3 1105 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 PYROXD2Q8N2H3 581 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 ARFGAP1Q8N6T3 406 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 ANKRD20A12PQ8NF67 263 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 GANCQ8TET4 914 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 ARHGEF2Q92974 986 aaKnown RBP14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 RETREG1Q9H6L5 497 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 NEUROG3Q9Y4Z2 214 aa14.3□□□□□ -0.12
PDLIM7-211ENST00000504318 DMXL2Q8TDJ6 3036 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 A0A1W2PQC6 194 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 LRRC53A6NM62 1247 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 PLEKP08567 350 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 FTH1P19P0C7X4 201 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 FERP16591 822 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 PBX1P40424 430 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 PRKCIP41743 596 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 MAPKAPK2P49137 400 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 SFSWAPQ12872 951 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 NR1I3Q14994 352 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 TEAD4Q15561 434 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 ZSCAN23Q3MJ62 389 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 FAM46CQ5VWP2 391 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 CYP4V2Q6ZWL3 525 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 DSG4Q86SJ6 1040 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 SPATS2Q86XZ4 545 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 DNAAF5Q86Y56 855 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 DRC7Q8IY82 874 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 ATP11CQ8NB49 1132 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 TMEM145Q8NBT3 493 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 ADAMTS14Q8WXS8 1223 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 MCEEQ96PE7 176 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 CEP44Q9C0F1 390 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 TNKS2Q9H2K2 1166 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 AIPL1Q9NZN9 384 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 TPX2Q9ULW0 747 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 ZFR2Q9UPR6 939 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 LAMA5O15230 3695 aa14.29□□□□□ -0.12
PDLIM7-211ENST00000504318 GOLGA6L3A6NEY3 463 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 WASH4PA8MWX3 477 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 C1QTNF3-AMACRE9PGA6 284 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 CBX4O00257 560 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 FLRT2O43155 660 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 SPINT1O43278 529 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 LEFTY1O75610 366 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 KRT37O76014 449 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 PROS1P07225 676 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 CD38P28907 300 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 L1CAMP32004 1257 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 ZNF165P49910 485 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 NXPH1P58417 271 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 SLC20A2Q08357 652 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 MAMLD1Q13495 774 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 ST3GAL2Q16842 350 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 NAPEPLDQ6IQ20 393 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 PLEKHA7Q6IQ23 1121 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 UNQ6494/PRO21346Q6UXR6 183 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 ZNF571Q7Z3V5 609 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 PLPP6Q8IY26 295 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 CHCHD4Q8N4Q1 142 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 KDF1Q8NAX2 398 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 TBC1D31Q96DN5 1066 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 PCMTD1Q96MG8 357 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 SELENOOQ9BVL4 669 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 HDAC8Q9BY41 377 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 KLC2Q9H0B6 622 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 PREBQ9HCU5 417 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 ATP13A1Q9HD20 1204 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 FZD10Q9ULW2 581 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 FCF1Q9Y324 198 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 MSRB2Q9Y3D2 182 aa14.28□□□□□ -0.12
PDLIM7-211ENST00000504318 TBC1D3DA0A087WVF3 549 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3IA0A087WXS9 549 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3EA0A087X179 549 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3KA0A087X1G2 549 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3FA6NER0 549 aaPredicted RBP14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3LB9A6J9 549 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 DDX3XO00571 662 aaKnown RBP eCLIP14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TRIM16O95361 564 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3HP0C7X1 549 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 CCT8P50990 548 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 FGL2Q14314 439 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 ZNF284Q2VY69 593 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 ARL13BQ3SXY8 428 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TMEM259Q4ZIN3 620 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 PRAMEF14Q5SWL7 426 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3GQ6DHY5 549 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3CQ6IPX1 549 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 DNAJC24Q6P3W2 148 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TBC1D3Q8IZP1 549 aaPredicted RBP14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 PCDH20Q8N6Y1 951 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 SAP25Q8TEE9 199 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 ISG20Q96AZ6 181 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 VCPIP1Q96JH7 1222 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 SERAC1Q96JX3 654 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 PEBP4Q96S96 227 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 ELF4Q99607 663 aaPredicted RBP14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 CNPY3Q9BT09 278 aa14.27□□□□□ -0.13
PDLIM7-211ENST00000504318 TRIM7Q9C029 511 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms