RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SCO1O75880 301 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 HOXD4P09016 255 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 LTA4HP09960 611 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 CLEC2LP0C7M8 214 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 GNA15P30679 374 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 HSD17B3P37058 310 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SOX9P48436 509 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 COPS2P61201 443 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 MRPS15P82914 257 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 KLRC3Q07444 240 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 AP1B1Q10567 949 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 MED21Q13503 144 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 RIN1Q13671 783 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC18A3Q16572 532 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 LRIT3Q3SXY7 679 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ZCWPW2Q504Y3 356 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ACSBG2Q5FVE4 666 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 FAM102AQ5T9C2 384 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 MROH9Q5TGP6 573 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SLX4IPQ5VYV7 408 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC24A5Q71RS6 500 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 RAB44Q7Z6P3 723 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 DDIASQ8IXT1 998 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 COLGALT2Q8IYK4 626 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ADSSL1Q8N142 457 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 CARFQ8N187 725 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SIX6OS1Q8N1H7 587 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 RNF148Q8N7C7 305 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 FBXO25Q8TCJ0 367 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 RFFLQ8WZ73 363 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 EME1Q96AY2 570 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TINF2Q9BSI4 451 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SPON2Q9BUD6 331 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 HIPK3Q9H422 1215 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 CAAP1Q9H8G2 361 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ARNT2Q9HBZ2 717 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 PALMDQ9NP74 551 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 PRDM9Q9NQV7 894 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TRNAU1APQ9NX07 287 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TNFRSF10DQ9UBN6 386 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TAGLN3Q9UI15 199 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 CPSF3Q9UKF6 684 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ORC6Q9Y5N6 252 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 IRS2Q9Y4H2 1338 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 C1orf232A0A0U1RR37 186 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TRDMT1O14717 391 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 COMTP21964 271 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ADORA2BP29275 332 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 PKLRP30613 574 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 CHRNA3P32297 505 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 GALNSP34059 522 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 HSPA9P38646 679 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 CASP4P49662 377 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 MAPK10P53779 464 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ACTR2P61160 394 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ATP2C1P98194 919 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 OCA2Q04671 838 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ORC1Q13415 861 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 GRIK4Q16099 956 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 INAVAQ3KP66 663 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 STRIP1Q5VSL9 837 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TMEM65Q6PI78 240 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ADGRG6Q86SQ4 1221 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 PATL1Q86TB9 770 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 PRUNE1Q86TP1 453 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 JAMLQ86YT9 394 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF687Q8N1G0 1237 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF579Q8NAF0 562 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TTC13Q8NBP0 860 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TBC1D15Q8TC07 691 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 VPS33AQ96AX1 596 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 RAD51AP1Q96B01 352 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 VPS39Q96JC1 886 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 BIRC8Q96P09 236 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 DOK1Q99704 481 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 EMILIN2Q9BXX0 1053 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 KLC2Q9H0B6 622 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 LRMDAQ9H2I8 198 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 C8orf33Q9H7E9 229 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 PARVBQ9HBI1 364 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 NMRK2Q9NPI5 230 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 FAM217BQ9NTX9 383 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 POLIQ9UNA4 740 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 YDJCA8MPS7 323 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SMIM22K7EJ46 135 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 M0QYV0 167 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ZBTB5O15062 677 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TSPAN3O60637 253 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 HEXBP07686 556 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ITGA4P13612 1032 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 HOXA7P31268 230 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 MAPKAPK2P49137 400 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 AP2S1P53680 142 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 NPEPPSP55786 919 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SRP54P61011 504 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 MRPS5P82675 430 aaKnown RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 BEX3Q00994 111 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF844Q08AG5 666 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 DPYDQ12882 1025 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 PEX6Q13608 980 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms