RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	DNAL1	Q4LDG9	190 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	SLC39A12	Q504Y0	691 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	C14orf80	Q86SX3	495 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ZNF280B	Q86YH2	543 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	IPMK	Q8NFU5	416 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ZIC5	Q96T25	663 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ZCWPW1	Q9H0M4	648 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	SLC39A10	Q9ULF5	831 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ANKRD6	Q9Y2G4	727 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	FRMPD3	Q5JV73	1810 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	MYLK	Q15746	1914 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	CCDC78	A2IDD5	438 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203		F8W8V4	182 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	PSMG1	O95456	288 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	MYCN	P04198	464 aa	Predicted RBP	13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	GEM	P55040	296 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ITGA7	Q13683	1181 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	POU6F1	Q14863	301 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	RCN1	Q15293	331 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	CMPK2	Q5EBM0	449 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	TIGD7	Q6NT04	549 aa	Predicted RBP	13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	POTEH	Q6S545	545 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	RANBP10	Q6VN20	620 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	LRRC49	Q8IUZ0	686 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	SCUBE1	Q8IWY4	988 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ZNF781	Q8N8C0	355 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	PTCD2	Q8WV60	388 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	SLC39A13	Q96H72	371 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	C1orf74	Q96LT6	269 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	FAM161B	Q96MY7	647 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	SERPINB11	Q96P15	392 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	PPP1R2P1	Q96PQ5	205 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	FICD	Q9BVA6	458 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	NOL6	Q9H6R4	1146 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	MRM3	Q9HC36	420 aa	Known RBP	13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ENTPD7	Q9NQZ7	604 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	RGS18	Q9NS28	235 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	OXSM	Q9NWU1	459 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	STOML1	Q9UBI4	398 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	CDY1	Q9Y6F8	540 aa		13.24	□□□□□ -0.29
MATR3-233	ENST00000504203	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TMEM189-UBE2V1	I3L0A0	370 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	APOA4	P06727	396 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	SLC35E2B	P0CK96	405 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	PAPOLA	P51003	745 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	CAP1	Q01518	475 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TAF11	Q15544	211 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	VWA5B1	Q5TIE3	1220 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	ESRP1	Q6NXG1	681 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	MSANTD2	Q6P1R3	559 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	EPGN	Q6UW88	154 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	LCA5	Q86VQ0	697 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	ULK2	Q8IYT8	1036 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	ZNF683	Q8IZ20	524 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	RDH11	Q8TC12	318 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	NAF1	Q96HR8	494 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	MRGPRX2	Q96LB1	330 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	GATA5	Q9BWX5	397 aa	Predicted RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	CDH19	Q9H159	772 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	8e-10	■■■□□ 17.9
MATR3-233	ENST00000504203	MPP6	Q9NZW5	540 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	FNIP2	Q9P278	1114 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	STX18	Q9P2W9	335 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	SCML2	Q9UQR0	700 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TCAF1	Q9Y4C2	921 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	PLXNA3	P51805	1871 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TARM1	B6A8C7	271 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TBX10	O75333	385 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	H2AFY	O75367	372 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	EOMES	O95936	686 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	MOCS2	O96007	188 aa	Predicted RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	PEX11B	O96011	259 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	DNAJB1	P25685	340 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	USP4	Q13107	963 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	THOC5	Q13769	683 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	UGP2	Q16851	508 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	CLLU1OS	Q5K130	101 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	PIK3R6	Q5UE93	754 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TRAF7	Q6Q0C0	670 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	GLB1L	Q6UWU2	654 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	ZYG11A	Q6WRX3	759 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	NET1	Q7Z628	596 aa	Predicted RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	MON1A	Q86VX9	555 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	SCN4B	Q8IWT1	228 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	COLGALT2	Q8IYK4	626 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	PCSK9	Q8NBP7	692 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	CLPTM1L	Q96KA5	538 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	ACE2	Q9BYF1	805 aa	Predicted RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	COG4	Q9H9E3	785 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TREX1	Q9NSU2	369 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	ABI2	Q9NYB9	513 aa	Predicted RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	CPSF2	Q9P2I0	782 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	SLC7A8	Q9UHI5	535 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	MID2	Q9UJV3	735 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	NOD1	Q9Y239	953 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TLR6	Q9Y2C9	796 aa		13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	MRPL42	Q9Y6G3	142 aa	Known RBP	13.23	□□□□□ -0.29
MATR3-233	ENST00000504203	TMEM88B	A6NKF7	163 aa		13.22	□□□□□ -0.29
MATR3-233	ENST00000504203	TK2	O00142	265 aa		13.22	□□□□□ -0.29
MATR3-233	ENST00000504203	PHGDH	O43175	533 aa	Known RBP	13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms