RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 TRIM33Q9UPN9 1127 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GDAQ9Y2T3 454 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 RWDD3Q9Y3V2 267 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PCDHB6Q9Y5E3 794 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CEP350Q5VT06 3117 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TOR1BO14657 336 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GIPC1O14908 333 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PDPK1O15530 556 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ADCY6O43306 1168 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CHEK2O96017 543 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 MT-ND3P03897 115 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 AOC1P19801 751 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GNL1P36915 607 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GARSP41250 739 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 FRKP42685 505 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TXNL4AP83876 142 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 EN1Q05925 392 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 NAB1Q13506 487 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 IHHQ14623 411 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 BBS9Q3SYG4 887 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 XKR3Q5GH77 459 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 DENND5AQ6IQ26 1287 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GALNT18Q6P9A2 607 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 RBM44Q6ZP01 1051 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GET4Q7L5D6 327 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GRAMD2AQ8IUY3 354 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 LURAP1LQ8IV03 231 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CLYBLQ8N0X4 340 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ZCCHC7Q8N3Z6 543 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 IPMKQ8NFU5 416 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 C10orf82Q8WW14 230 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 WNT8BQ93098 351 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CIDECQ96AQ7 238 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 SPATA17Q96L03 361 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 C8orf48Q96LL4 319 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 KREMEN1Q96MU8 473 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 KCNC2Q96PR1 638 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 RBM15Q96T37 977 aaKnown RBP eCLIP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 RBM38Q9H0Z9 239 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 EPHX3Q9H6B9 360 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 S100A14Q9HCY8 104 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PARVAQ9NVD7 372 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ETNK2Q9NVF9 386 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TAS2R7Q9NYW3 318 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PKD2L2Q9NZM6 624 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 KIF17Q9P2E2 1029 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 EGFL7Q9UHF1 273 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 RABL2BQ9UNT1 228 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ERVK-11Q9UQG0 969 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PCDHGA3Q9Y5H0 932 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PTCH2Q9Y6C5 1203 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TEX51A0A1B0GUA7 166 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 RCCD1A6NED2 376 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ERI2A8K979 691 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 GRM6O15303 877 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 HOXC11O43248 304 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 HRO43593 1189 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 SNAP91O60641 907 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 DUSP11O75319 330 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TOM1L1O75674 476 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CABYRO75952 493 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 FKBP9O95302 570 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TFRCP02786 760 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ENDOUP21128 410 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 NFKBIAP25963 317 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CNTFP26441 200 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TARSP26639 723 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 RFC2P35250 354 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ACADSBP45954 432 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ZFP36L2P47974 494 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CCNG2Q16589 344 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 DALRD3Q5D0E6 543 aaKnown RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 STRADAQ7RTN6 431 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 BPHLQ86WA6 291 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CAMK1DQ8IU85 385 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 LACC1Q8IV20 430 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 OR2W6PQ8NHA6 318 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 LILRB4Q8NHJ6 448 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 BLOC1S5Q8TDH9 187 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 BRI3BPQ8WY22 251 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CDRT15Q96T59 188 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TMUB1Q9BVT8 246 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TRIM31Q9BZY9 425 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ACSS3Q9H6R3 686 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 MINDY3Q9H8M7 445 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ARHGEF38Q9NXL2 777 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 PTTG3PQ9NZH4 202 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 SLC7A8Q9UHI5 535 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 CUL9Q8IWT3 2517 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 ZSCAN5CA6NGD5 496 aaPredicted RBP2.83□□□□□ -1.96
NEDD4-204ENST00000503468 LRRIQ4A6NIV6 560 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM88BA6NKF7 163 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 H3BRJ5 948 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 SCN2BO60939 215 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 AKAP3O75969 853 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 OR4F21O95013 312 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 VNN1O95497 513 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 THRAP10827 490 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 NAT1P18440 290 aa2.83□□□□□ -1.96
NEDD4-204ENST00000503468 C4BPBP20851 252 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms